contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA692200" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12658620 | 12658620 | PRJNA692200_S_NODE_11930_length_207_cov_1.632911_g11873_i0 | PRJNA692200 | 11930 | 207 | 1.632911 | 3.38012577 | Gopherus evgoodei | 1825980 | Chordata | Chordata | 119 | 9.909999999999998e-31 | NR | XP_030415344.1 | 1825980 | g11873 | i0 | 88.3 | 28.695652173913 | 60 | 7 | 87 | 0 | 1 | 180 | 241 | 300 | XP_030415344.1 DNA repair protein RAD51 homolog 1 isoform X2 [Gopherus evgoodei] | diamond | 5940 | 119 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Testudines | Testudinidae | Gopherus | Gopherus evgoodei | ||
| 22856656 | 22856656 | PRJNA692200_S_NODE_338_length_542_cov_668.328600_g307_i0 | PRJNA692200 | 338 | 542 | 668.3286 | 3622.341012 | Chordata | 7711 | Chordata | Chordata | 199 | 5.310000000000001e-59 | NR | KAJ1096059.1 | 8319 | g307 | i0 | 62.1 | 66.3985239852398 | 153 | 57 | 84.1 | 1 | 6 | 461 | 217 | 369 | KAJ1096059.1 hypothetical protein NDU88_001206 [Pleurodeles waltl] | diamond | 35988 | 201 | 0.990049751243781 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Caudata | Salamandridae | Pleurodeles | Pleurodeles waltl | |
| 27978270 | 27978270 | PRJNA692200_S_NODE_5385_length_282_cov_2.639485_g5328_i0 | PRJNA692200 | 5385 | 282 | 2.639485 | 7.4433477 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 66.6 | 2.2e-10 | NR | XP_016008649.1 | 9407 | g5328 | i0 | 60 | 5.88297872340426 | 45 | 18 | 47.9 | 0 | 282 | 148 | 333 | 377 | XP_016008649.1 dipeptidyl peptidase 1 isoform X2 [Rousettus aegyptiacus] | diamond | 1659 | 67 | 0.994029850746269 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Chiroptera | Pteropodidae | Rousettus | Rousettus aegyptiacus | |
| 29135455 | 29135455 | PRJNA692200_S_NODE_6849_length_259_cov_2.152381_g6792_i0 | PRJNA692200 | 6849 | 259 | 2.152381 | 5.57466679 | Aquarana catesbeiana | 8400 | Chordata | Chordata | 45.1 | 8.03e-4 | NR | PIO16144.1 | 8400 | g6792 | i0 | 41.4 | 1.5984555984556 | 70 | 34 | 81.1 | 3 | 251 | 42 | 11 | 73 | PIO16144.1 hypothetical protein AB205_0051180 [Aquarana catesbeiana] | diamond | 414 | 45.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Ranidae | Aquarana | Aquarana catesbeiana | |
| 30367363 | 30367363 | PRJNA692200_S_NODE_4692_length_295_cov_3.109756_g4635_i0 | PRJNA692200 | 4692 | 295 | 3.109756 | 9.1737802 | Cervus hanglu yarkandensis | 84702 | Chordata | Chordata | 91.3 | 1.62e-21 | NR | KAF4026532.1 | 84702 | g4635 | i0 | 51.1 | 2.4406779661017 | 90 | 39 | 86.4 | 2 | 14 | 268 | 12 | 101 | KAF4026532.1 hypothetical protein G4228_018388, partial [Cervus hanglu yarkandensis] | diamond | 720 | 91.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Cervidae | Cervus | Cervus hanglu | |
| 31863776 | 31863776 | PRJNA692200_S_NODE_12017_length_206_cov_3.254777_g11960_i0 | PRJNA692200 | 12017 | 206 | 3.254777 | 6.70484062 | Metazoa | 33208 | Chordata | Chordata | 43.5 | 0.0122 | NR | XP_018425512.1 | 125878 | g11960 | i0 | 56.8 | 3.36407766990291 | 37 | 15 | 53.9 | 1 | 201 | 91 | 436 | 471 | XP_018425512.1 PREDICTED: alanine aminotransferase 2 [Nanorana parkeri] | diamond | 693 | 43.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Dicroglossidae | Nanorana | Nanorana parkeri |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;