RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA692200" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA692200 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27788950 27788950 PRJNA692200_S_NODE_10084_length_223_cov_1.149425_g10027_i0 PRJNA692200 10084 223 1.149425 2.56321775 Bacillati 1783272 Bacteria Bacteria 75.5 4.11e-16   NR MEO0563457.1 2026724 g10027 i0 75.6 6.75336322869955 45 11 60.5 0 85 219 3 47 MEO0563457.1 cold-shock protein [Chloroflexota bacterium] diamond 1506 75.9 0.994729907773386 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30493381 30493381 PRJNA692200_S_NODE_2973_length_341_cov_2.702055_g2916_i0 PRJNA692200 2973 341 2.702055 9.21400755 Anaerolineae bacterium 2052143 Bacteria Bacteria 62.4 1.04e-9   NR MCW5848612.1 2052143 g2916 i0 49.3 0.607038123167155 69 35 60.7 0 43 249 56 124 MCW5848612.1 profilin [Anaerolineae bacterium] diamond 207 62.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31156485 31156485 PRJNA692200_S_NODE_435_length_517_cov_14.869658_g402_i0 PRJNA692200 435 517 14.869658 76.87613186 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 94 5.1800000000000006e-21   NR MDO9333994.1 2026733 g402 i0 92.5 0.307543520309478 53 3 30.2 1 5 160 83 135 MDO9333994.1 30S ribosomal protein S4 [Dehalococcoidales bacterium] diamond 159 94 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
31694400 31694400 PRJNA692200_S_NODE_14157_length_192_cov_4.286713_g14100_i0 PRJNA692200 14157 192 4.286713 8.23048896 Chloroflexota bacterium 2026724 Bacteria Bacteria 41.6 0.0499   NR NOH04063.1 2026724 g14100 i0 45.9 0.578125 37 20 57.8 0 180 70 419 455 NOH04063.1 dipeptidase [Chloroflexota bacterium] diamond 111 41.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;