RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA692200" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 1 ✖

bioproject 1

  • PRJNA692200 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31030686 31030686 PRJNA692200_S_NODE_19055_length_169_cov_2.750000_g18998_i0 PRJNA692200 19055 169 2.75 4.6475 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 42 0.00251   NR MCD6367831.1 3121606 g18998 i0 58.1 2.73372781065089 31 13 55 0 4 96 8 38 MCD6367831.1 DNA-directed RNA polymerase subunit P [Candidatus Aenigmatarchaeota archaeon] diamond 462 42 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;