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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA692200" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 17 ✖

bioproject 1

  • PRJNA692200 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7051363 7051363 PRJNA692200_S_NODE_19866_length_167_cov_1.686441_g19809_i0 PRJNA692200 19866 167 1.686441 2.81635647 Raphidocelis subcapitata 307507 Plants Plants 59.3 1.83e-8   NR GBF90757.1 307507 g19809 i0 53.1 0.880239520958084 49 23 88 0 3 149 315 363 GBF90757.1 ubiquitin carboxyl-terminal hydrolase-like protein [Raphidocelis subcapitata] diamond 147 59.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
9601356 9601356 PRJNA692200_S_NODE_508_length_503_cov_10.823789_g475_i0 PRJNA692200 508 503 10.823789 54.44365867 Coccomyxa subellipsoidea C-169 574566 Plants Plants 196 7.02e-60   NR XP_005643653.1 574566 g475 i0 66.7 2.52286282306163 141 47 84.1 0 3 425 107 247 XP_005643653.1 60S ribosomal protein L7 [Coccomyxa subellipsoidea C-169] diamond 1269 196 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
14702000 14702000 PRJNA692200_S_NODE_832_length_460_cov_196.836983_g792_i0 PRJNA692200 832 460 196.836983 905.4501218 Trebouxia sp. C 2796353 Plants Plants 73.9 8.36e-14   NR KAL0042167.1 2905653 g792 i0 54 1.29782608695652 63 28 40.4 1 54 239 3 65 KAL0042167.1 hypothetical protein WJX77_005300 [Trebouxia sp. C0004] diamond 597 73.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
21075074 21075074 PRJNA692200_S_NODE_1477_length_408_cov_4.799443_g1422_i0 PRJNA692200 1477 408 4.799443 19.58172744 Raphidocelis subcapitata 307507 Plants Plants 110 2.83e-25   NR GBF98594.1 307507 g1422 i0 65.2 2.58823529411765 89 30 64.7 1 399 136 325 413 GBF98594.1 60S ribosomal protein L4 [Raphidocelis subcapitata] diamond 1056 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
24899093 24899093 PRJNA692200_S_NODE_220_length_580_cov_629.561205_g194_i0 PRJNA692200 220 580 629.561205 3651.454989 Chlamydomonas eustigma 1157962 Plants Plants 226 9.77e-72   NR GAX77325.1 1157962 g194 i0 68.3 3.39310344827586 164 52 84.8 0 576 85 41 204 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 1968 226 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
26861407 26861407 PRJNA692200_S_NODE_13421_length_197_cov_1.695946_g13364_i0 PRJNA692200 13421 197 1.695946 3.34101362 Coccomyxa sp. Obi 2315456 Plants Plants 50.1 5.04e-5   NR BDA45109.1 2315456 g13364 i0 36.8 1.03553299492386 68 35 92.9 2 8 190 8 74 BDA45109.1 THO complex subunit 3 [Coccomyxa sp. Obi] diamond 204 50.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
27346946 27346946 PRJNA692200_S_NODE_15563_length_185_cov_2.139706_g15506_i0 PRJNA692200 15563 185 2.139706 3.9584561 Chlamydomonadales 3042 Plants Plants 61.2 4.21e-9   NR XP_001701753.1 3055 g15506 i0 58.6 4.7027027027027 58 24 94.1 0 177 4 196 253 XP_001701753.1 uncharacterized protein CHLRE_02g088000v5 [Chlamydomonas reinhardtii] diamond 870 61.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
27430448 27430448 PRJNA692200_S_NODE_18823_length_170_cov_2.107438_g18766_i0 PRJNA692200 18823 170 2.107438 3.5826446 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 47.8 2.38e-4   NR KAF6258334.1 2650976 g18766 i0 46.5 0.758823529411765 43 23 75.9 0 3 131 803 845 KAF6258334.1 elongation factor 2 (EF-2, EF-TU) [Scenedesmus sp. NREL 46B-D3] diamond 129 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
27683162 27683162 PRJNA692200_S_NODE_2724_length_350_cov_4.803987_g2667_i0 PRJNA692200 2724 350 4.803987 16.8139545 Tetradesmus obliquus 3088 Plants Plants 77.4 4.83e-16   NR WIA13555.1 3088 g2667 i0 54.4 0.677142857142857 79 34 67.7 1 305 69 1 77 WIA13555.1 hypothetical protein OEZ85_007123 [Tetradesmus obliquus] diamond 237 77.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28409046 28409046 PRJNA692200_S_NODE_486_length_508_cov_15.862745_g453_i0 PRJNA692200 486 508 15.862745 80.5827446 Pedinophyceae sp. YPF-7 765719 Plants Plants 102 1.42e-24   NR CAG9460866.1 765719 g453 i0 46.8 0.832677165354331 141 56 83.3 2 498 76 1 122 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 423 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
29829786 29829786 PRJNA692200_S_NODE_16431_length_181_cov_1.181818_g16374_i0 PRJNA692200 16431 181 1.181818 2.13909058 Polytomella parva 51329 Plants Plants 95.1 2.14e-21   NR QKY14960.1 51329 g16374 i0 83.3 0.994475138121547 60 10 99.4 0 2 181 235 294 QKY14960.1 pyruvate dehydrogenase E1 component subunit alpha - subunit beta (PDh-E1 BETA) [Polytomella parva] diamond 180 95.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
30915537 30915537 PRJNA692200_S_NODE_12494_length_203_cov_1.915584_g12437_i0 PRJNA692200 12494 203 1.915584 3.88863552 Eukaryota 2759 Plants Plants 73.9 2.24e-14   NR PRW58685.1 3076 g12437 i0 60 2.73399014778325 60 23 87.2 1 200 24 79 138 PRW58685.1 nucleoredoxin 1 [Chlorella sorokiniana] diamond 555 74.3 0.994616419919246 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30967378 30967378 PRJNA692200_S_NODE_17914_length_174_cov_1.240000_g17857_i0 PRJNA692200 17914 174 1.24 2.1576 Helicosporidium sp. ATCC 5 1907511 Plants Plants 77 1.19e-14   NR KDD76893.1 1291522 g17857 i0 64.9 2.91379310344828 57 15 98.3 1 3 173 1115 1166 KDD76893.1 domain 6 of RNA polymerase Rpb2 [Helicosporidium sp. ATCC 50920] diamond 507 77 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
31156484 31156484 PRJNA692200_S_NODE_17915_length_174_cov_1.240000_g17858_i0 PRJNA692200 17915 174 1.24 2.1576 Haematococcus lacustris 44745 Plants Plants 42.4 0.0204   NR KAJ9515634.1 44745 g17858 i0 36.7 0.844827586206897 49 31 84.5 0 15 161 373 421 KAJ9515634.1 hypothetical protein QJQ45_021737 [Haematococcus lacustris] diamond 147 42.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31990433 31990433 PRJNA692200_S_NODE_6978_length_257_cov_2.274038_g6921_i0 PRJNA692200 6978 257 2.274038 5.84427766 Eukaryota 2759 Plants Plants 68.2 4.87e-11   NR KAI3433814.1 3077 g6921 i0 50.8 16.6575875486381 65 32 75.9 0 16 210 542 606 KAI3433814.1 hypothetical protein D9Q98_003618 [Chlorella vulgaris] diamond 4281 68.6 0.994169096209913 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
32517327 32517327 PRJNA692200_S_NODE_14619_length_190_cov_1.028369_g14562_i0 PRJNA692200 14619 190 1.028369 1.9539011 Bryopsis sp. KO-2 3115439 Plants Plants 40.4 0.0428   NR GMH36206.1 3041901 g14562 i0 41.5 0.647368421052632 41 24 64.7 0 186 64 45 85 GMH36206.1 hypothetical protein BSKO_04074 [Bryopsis sp. KO-2023] diamond 123 40.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
32674555 32674555 PRJNA692200_S_NODE_5880_length_273_cov_2.290179_g5823_i0 PRJNA692200 5880 273 2.290179 6.25218867 Chlamydomonas eustigma 1157962 Plants Plants 48.1 7.1e-4   NR GAX73886.1 1157962 g5823 i0 42.1 0.626373626373626 57 33 62.6 0 267 97 1228 1284 GAX73886.1 hypothetical protein CEUSTIGMA_g1336.t1 [Chlamydomonas eustigma] diamond 171 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;