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contig_metadata

11 rows where analysis = "diamond" and bioproject = "PRJNA691918"

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tax_superkingdom 3

tax_clade 2

bioproject 1

  • PRJNA691918 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21074943 21074943 PRJNA691918_S_NODE_57_length_250_cov_13654.908676_g56_i0 PRJNA691918 57 250 13654.908676 34137.27169 Bacteroidota bacterium 1898104 Bacteria Bacteria 123 3.5099999999999993e-31   NR MFM1971365.1 1898104 g56 i0 75 0.912 76 19 91.2 0 1 228 114 189 MFM1971365.1 Phytophthora parasitica virus [Bacteroidota bacterium] diamond 228 123 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
23625189 23625189 PRJNA691918_S_NODE_39_length_264_cov_13215.871245_g38_i0 PRJNA691918 39 264 13215.871245 34889.9000868 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 77.4 2.88e-16   NR XP_018645103.1 6183 g38 i0 58.6 4.09090909090909 70 26 78.4 2 54 260 18 85 XP_018645103.1 unnamed protein product [Schistosoma mansoni] diamond 1080 77.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
28693373 28693373 PRJNA691918_S_NODE_407_length_158_cov_11.535433_g406_i0 PRJNA691918 407 158 11.535433 18.22598414 Capybara microvirus Cap3_SP_649 2585488 Viruses Viruses 87 4.32e-19   NR QCS36712.1 2585488 g406 i0 75 0.987341772151899 52 13 98.7 0 156 1 20 71 QCS36712.1 replication initiator protein [Capybara microvirus Cap3_SP_649] diamond 156 87 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Capybara microvirus Cap3_SP_649
29387962 29387962 PRJNA691918_S_NODE_289_length_179_cov_20.114865_g288_i0 PRJNA691918 289 179 20.114865000000002 36.00560835 Sphingobacteriia bacterium 28-36-52 1970573 Bacteria Bacteria 58.9 3.09e-8   NR OYY99577.1 1970573 g288 i0 86.2 0.486033519553073 29 4 48.6 0 92 178 1 29 OYY99577.1 MAG: hypothetical protein B7Y37_13885 [Sphingobacteriia bacterium 28-36-52] diamond 87 58.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia       Sphingobacteriia bacterium 28-36-52
29513921 29513921 PRJNA691918_S_NODE_430_length_154_cov_3.934959_g429_i0 PRJNA691918 430 154 3.934959 6.05983686 Fidelibacterota bacterium 2026760 Bacteria Bacteria 47.4 2.06e-4   NR MBT5759297.1 2026760 g429 i0 61.3 0.603896103896104 31 12 60.4 0 2 94 167 197 MBT5759297.1 hypothetical protein [Fidelibacterota bacterium] diamond 93 47.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30493373 30493373 PRJNA691918_S_NODE_33_length_275_cov_14.651639_g32_i0 PRJNA691918 33 275 14.651639 40.29200725 Gilvimarinus sp. 1_MG-2023 3062638 Bacteria Bacteria 112 1.92e-30   NR MDO6749822.1 3062638 g32 i0 100 1.13454545454545 52 0 56.7 0 274 119 14 65 MDO6749822.1 hypothetical protein [Gilvimarinus sp. 1_MG-2023] diamond 312 112 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Cellvibrionaceae Gilvimarinus Gilvimarinus sp. 1_MG-2023
30714424 30714424 PRJNA691918_S_NODE_14_length_310_cov_32.956989_g13_i0 PRJNA691918 14 310 32.956989 102.1666659 Funneliformis geosporum 1117311 Fungi Fungi 58.5 8.78e-9   NR CAI2174852.1 1117311 g13 i0 62.2 0.435483870967742 45 17 43.5 0 263 129 11 55 CAI2174852.1 9324_t:CDS:2 [Funneliformis geosporum] diamond 135 58.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis geosporum
30935756 30935756 PRJNA691918_S_NODE_154_length_207_cov_6.835227_g153_i0 PRJNA691918 154 207 6.835227 14.14891989 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 107 5.35e-25   NR XCM67828.1 3003959 g153 i0 73.1 1.94202898550725 67 18 97.1 0 3 203 1210 1276 XCM67828.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 402 107 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31030684 31030684 PRJNA691918_S_NODE_255_length_186_cov_28.574194_g254_i0 PRJNA691918 255 186 28.574194 53.14800084 Skomarfal virus 17 3063065 Viruses Viruses 50.4 3.29e-5   NR WPR18321.1 3063065 g254 i0 47.3 0.887096774193548 55 28 88.7 1 9 173 32 85 WPR18321.1 MAG: capsid protein [Skomarfal virus 17] diamond 165 50.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Skomarfal virus 17
31725994 31725994 PRJNA691918_S_NODE_217_length_193_cov_6.413580_g216_i0 PRJNA691918 217 193 6.41358 12.3782094 Picornaviridae sp. 1530251 Viruses Viruses 88.2 1.81e-18   NR URG14535.1 1530251 g216 i0 63.5 1.94300518134715 63 23 97.9 0 191 3 388 450 URG14535.1 MAG: RNA dependent RNA polymerase, partial [Picornaviridae sp.] diamond 375 88.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
32580510 32580510 PRJNA691918_S_NODE_259_length_185_cov_49.207792_g258_i0 PRJNA691918 259 185 49.207792 91.0344152 Mycoplasmopsis arginini 2094 Bacteria Bacteria 72.4 4.94e-15   NR WP_282459951.1 2094 g258 i0 100 0.551351351351351 34 0 55.1 0 48 149 39 72 WP_282459951.1 hypothetical protein, partial [Mycoplasmopsis arginini] diamond 102 72.4 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis arginini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;