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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA690234" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690234 · 30 ✖

analysis 1

  • diamond · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3221310 3221310 PRJNA690234_P_NODE_6543_length_505_cov_2.377315_g6178_i0 PRJNA690234 6543 505 2.377315 12.00544075 Hordeum vulgare subsp. vulgare 112509 Plants Plants 268 4.669999999999999e-87   NR BAK02675.1 112509 g6178 i0 73.7 7.95445544554455 167 44 99.2 0 4 504 16 182 BAK02675.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 4017 268 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
4498198 4498198 PRJNA690234_P_NODE_22764_length_266_cov_1.481865_g22397_i0 PRJNA690234 22764 266 1.481865 3.9417609 Solanum chilense 4083 Plants Plants 171 3.0799999999999992e-52   NR TMW96214.1 4083 g22397 i0 97.6 0.958646616541353 85 2 95.9 0 11 265 1 85 TMW96214.1 hypothetical protein EJD97_007732 [Solanum chilense] diamond 255 171 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum chilense
7048678 7048678 PRJNA690234_P_NODE_19586_length_286_cov_3.779343_g19219_i0 PRJNA690234 19586 286 3.779343 10.80892098 Eukaryota 2759 Plants Plants 119 7.83e-32   NR XP_058107496.1 86752 g19219 i0 71.4 22.6468531468531 84 24 88.1 0 252 1 4 87 XP_058107496.1 calmodulin-7-like isoform X1 [Magnolia sinica] diamond 6477 120 0.991666666666667 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Magnoliales Magnoliaceae Magnolia Magnolia sinica
17248264 17248264 PRJNA690234_P_NODE_31094_length_243_cov_0.917647_g30727_i0 PRJNA690234 31094 243 0.917647 2.22988221 Streptophyta 35493 Plants Plants 155 1.13e-44   NR XP_021595716.1 3983 g30727 i0 86.3 72.0987654320988 80 11 98.8 0 242 3 118 197 XP_021595716.1 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial isoform X3 [Manihot esculenta] diamond 17520 156 0.993589743589744 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Manihot Manihot esculenta
26904134 26904134 PRJNA690234_P_NODE_31981_length_242_cov_0.923077_g31614_i0 PRJNA690234 31981 242 0.923077 2.23384634 Solanaceae 4070 Plants Plants 47.4 8.27e-4   NR XP_070026381.1 4096 g31614 i0 49.1 2.61570247933884 57 29 70.7 0 2 172 210 266 XP_070026381.1 uncharacterized protein [Nicotiana sylvestris] diamond 633 47.8 0.99163179916318 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana sylvestris
27283540 27283540 PRJNA690234_P_NODE_28003_length_248_cov_0.891429_g27636_i0 PRJNA690234 28003 248 0.891429 2.21074392 Solanum 4107 Plants Plants 113 6.139999999999999e-31   NR TMW91829.1 4083 g27636 i0 100 1.33064516129032 55 0 66.5 0 246 82 21 75 TMW91829.1 hypothetical protein EJD97_013829 [Solanum chilense] diamond 330 113 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum chilense
27315263 27315263 PRJNA690234_P_NODE_27763_length_248_cov_7.348571_g27396_i0 PRJNA690234 27763 248 7.348571 18.22445608 Solanaceae 4070 Plants Plants 51.6 1.71e-6   NR KAK4730960.1 50273 g27396 i0 64.7 0.858870967741935 34 12 41.1 0 138 37 11 44 KAK4730960.1 hypothetical protein R3W88_023948 [Solanum pinnatisectum] diamond 213 51.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum pinnatisectum
28314176 28314176 PRJNA690234_P_NODE_32006_length_242_cov_0.923077_g31639_i0 PRJNA690234 32006 242 0.923077 2.23384634 Nicotiana tabacum 4097 Plants Plants 70.5 4.79e-12   NR XP_016456864.1 4097 g31639 i0 40.7 1.00413223140496 81 42 93 2 241 17 161 241 XP_016456864.1 F-box/kelch-repeat protein At1g67480-like isoform X1 [Nicotiana tabacum] diamond 243 70.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana tabacum
28345642 28345642 PRJNA690234_P_NODE_17486_length_303_cov_3.373913_g17119_i0 PRJNA690234 17486 303 3.373913 10.22295639 Jatropha curcas 180498 Plants Plants 44.3 0.0211   NR KDP35323.1 180498 g17119 i0 32.2 0.861386138613861 87 54 86.1 1 283 23 86 167 KDP35323.1 hypothetical protein JCGZ_09482 [Jatropha curcas] diamond 261 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Jatropha Jatropha curcas
28452020 28452020 PRJNA690234_P_NODE_13566_length_344_cov_1.332103_g13199_i0 PRJNA690234 13566 344 1.332103 4.58243432 Eukaryota 2759 Plants Plants 91.7 8.81e-19   NR XP_024175667.1 74649 g13199 i0 47.8 10.6220930232558 92 46 78.5 1 1 270 892 983 XP_024175667.1 uncharacterized protein LOC112181529 [Rosa chinensis] diamond 3654 92.4 0.992424242424242 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Rosa Rosa chinensis
28566627 28566627 PRJNA690234_P_NODE_12227_length_362_cov_2.217993_g11860_i0 PRJNA690234 12227 362 2.217993 8.02913466 Olea europaea var. sylvestris 158386 Plants Plants 48.5 0.00135   NR XP_022888557.1 158386 g11860 i0 32.9 1.63259668508287 76 35 49.7 2 168 347 264 339 XP_022888557.1 uncharacterized protein LOC111404064 [Olea europaea var. sylvestris] diamond 591 48.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
28693188 28693188 PRJNA690234_P_NODE_25167_length_253_cov_0.866667_g24800_i0 PRJNA690234 25167 253 0.866667 2.19266751 Solanum tuberosum 4113 Plants Plants 111 2.38e-27   NR KAH0661537.1 4113 g24800 i0 64.1 2.77470355731225 78 28 92.5 0 12 245 26 103 KAH0661537.1 hypothetical protein KY284_026468 [Solanum tuberosum] diamond 702 111 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum tuberosum
29166825 29166825 PRJNA690234_P_NODE_27189_length_249_cov_2.619318_g26822_i0 PRJNA690234 27189 249 2.619318 6.52210182 Carex littledalei 544730 Plants Plants 102 2.51e-23   NR KAF3333677.1 544730 g26822 i0 53.7 2.95180722891566 82 38 98.8 0 248 3 253 334 KAF3333677.1 multicopy suppressor of IRA1 [Carex littledalei] diamond 735 102 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Cyperaceae Carex Carex littledalei
29639903 29639903 PRJNA690234_P_NODE_13630_length_343_cov_1.733333_g13263_i0 PRJNA690234 13630 343 1.733333 5.94533219 Helianthus annuus 4232 Plants Plants 76.3 1.92e-13   NR KAF5803682.1 4232 g13263 i0 34.8 3.97959183673469 112 73 98 0 336 1 253 364 KAF5803682.1 putative nucleotidyltransferase, Ribonuclease H [Helianthus annuus] diamond 1365 76.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
30220177 30220177 PRJNA690234_P_NODE_17652_length_302_cov_1.362445_g17285_i0 PRJNA690234 17652 302 1.362445 4.1145839 Fabaceae 3803 Plants Plants 46.6 0.00329   NR XP_027365417.1 3816 g17285 i0 61.8 5.02649006622517 34 13 33.8 0 50 151 32 65 XP_027365417.1 nucleolar complex protein 2 homolog isoform X2 [Abrus precatorius] diamond 1518 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Abrus Abrus precatorius
30410154 30410154 PRJNA690234_P_NODE_27893_length_248_cov_1.337143_g27526_i0 PRJNA690234 27893 248 1.337143 3.31611464 Eukaryota 2759 Plants Plants 80.9 4.94e-16   NR XP_008788790.1 42345 g27526 i0 46.2 5.68548387096774 78 41 94.4 1 11 244 1 77 XP_008788790.1 protein MEMO1 isoform X2 [Phoenix dactylifera] diamond 1410 81.6 0.991421568627451 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Arecales Arecaceae Phoenix Phoenix dactylifera
30556132 30556132 PRJNA690234_P_NODE_31293_length_243_cov_0.917647_g30926_i0 PRJNA690234 31293 243 0.917647 2.22988221 Nicotiana tabacum 4097 Plants Plants 50.8 9.12e-6   NR XP_016465741.1 4097 g30926 i0 52 0.617283950617284 50 23 60.5 1 12 158 63 112 XP_016465741.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Nicotiana tabacum] diamond 150 50.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana tabacum
31136185 31136185 PRJNA690234_P_NODE_21455_length_274_cov_1.393035_g21088_i0 PRJNA690234 21455 274 1.393035 3.8169159 Streptophyta 35493 Plants Plants 47.8 2.8e-4   NR XP_062106700.1 3486 g21088 i0 67.6 4.21532846715328 34 11 37.2 0 269 168 100 133 XP_062106700.1 thioredoxin H2-like [Humulus lupulus] diamond 1155 47.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
31219509 31219509 PRJNA690234_P_NODE_31215_length_243_cov_0.917647_g30848_i0 PRJNA690234 31215 243 0.917647 2.22988221 Solanum tuberosum 4113 Plants Plants 67 1.06e-10   NR KAH0730099.1 4113 g30848 i0 58.2 3.28395061728395 55 23 67.9 0 171 7 2 56 KAH0730099.1 hypothetical protein KY289_001287 [Solanum tuberosum] diamond 798 67 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum tuberosum
31599554 31599554 PRJNA690234_P_NODE_32016_length_242_cov_0.923077_g31649_i0 PRJNA690234 32016 242 0.923077 2.23384634 Capsicum annuum 4072 Plants Plants 53.5 8.53e-7   NR KAF3620620.1 4072 g31649 i0 48.3 0.71900826446281 58 30 71.9 0 230 57 56 113 KAF3620620.1 hypothetical protein FXO38_32263 [Capsicum annuum] diamond 174 53.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
32200533 32200533 PRJNA690234_P_NODE_25638_length_252_cov_0.871508_g25271_i0 PRJNA690234 25638 252 0.871508 2.19620016 Solanum verrucosum 315347 Plants Plants 62 4.34e-10   NR WMV55237.1 315347 g25271 i0 49.2 0.726190476190476 61 29 70.2 1 6 182 37 97 WMV55237.1 hypothetical protein MTR67_048622 [Solanum verrucosum] diamond 183 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum verrucosum
32453875 32453875 PRJNA690234_P_NODE_7019_length_487_cov_1.251208_g6653_i0 PRJNA690234 7019 487 1.251208 6.09338296 Phaseolus coccineus 3886 Plants Plants 64.7 7.42e-9   NR KAK7372102.1 3886 g6653 i0 36.2 0.850102669404518 138 82 83.8 2 409 2 150 283 KAK7372102.1 hypothetical protein VNO80_05471 [Phaseolus coccineus] diamond 414 64.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Phaseolus Phaseolus coccineus
32517149 32517149 PRJNA690234_P_NODE_8219_length_447_cov_2.620321_g7853_i0 PRJNA690234 8219 447 2.620321 11.71283487 Solanum chilense 4083 Plants Plants 146 6.529999999999998e-43   NR TMW86062.1 4083 g7853 i0 94.7 0.503355704697987 75 4 50.3 0 22 246 1 75 TMW86062.1 hypothetical protein EJD97_021994 [Solanum chilense] diamond 225 146 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum chilense
32580341 32580341 PRJNA690234_P_NODE_5039_length_581_cov_2.633858_g4677_i0 PRJNA690234 5039 581 2.633858 15.30271498 Hibiscus sabdariffa 183260 Plants Plants 62.4 6.09e-8   NR KAK9006261.1 183260 g4677 i0 35.9 0.676419965576592 131 78 66.1 4 19 402 65 192 KAK9006261.1 hypothetical protein V6N11_035306 [Hibiscus sabdariffa] diamond 393 62.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Hibiscus Hibiscus sabdariffa
32580345 32580345 PRJNA690234_P_NODE_9119_length_424_cov_1.142450_g8753_i0 PRJNA690234 9119 424 1.14245 4.843988 Cannabis sativa 3483 Plants Plants 47 0.0083   NR KAF4368741.1 3483 g8753 i0 39.3 1.29481132075472 61 28 38.2 2 64 225 485 543 KAF4368741.1 hypothetical protein G4B88_003614 [Cannabis sativa] diamond 549 47 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
32642790 32642790 PRJNA690234_P_NODE_30760_length_243_cov_2.535294_g30393_i0 PRJNA690234 30760 243 2.535294 6.16076442 Mangifera indica 29780 Plants Plants 54.7 2.37e-6   NR XP_044479337.1 29780 g30393 i0 47.9 2.51851851851852 48 24 58 1 240 100 894 941 XP_044479337.1 ubiquitin carboxyl-terminal hydrolase 2-like [Mangifera indica] diamond 612 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Anacardiaceae Mangifera Mangifera indica
32674376 32674376 PRJNA690234_P_NODE_26320_length_251_cov_0.876404_g25953_i0 PRJNA690234 26320 251 0.876404 2.19977404 Canavalia gladiata 3824 Plants Plants 43.9 0.0159   NR KAK7359049.1 3824 g25953 i0 31.4 0.836653386454183 70 43 83.7 1 232 23 403 467 KAK7359049.1 hypothetical protein VNO77_00994 [Canavalia gladiata] diamond 210 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Canavalia Canavalia gladiata
32674379 32674379 PRJNA690234_P_NODE_29500_length_245_cov_2.709302_g29133_i0 PRJNA690234 29500 245 2.709302 6.6377899 Solanum tuberosum 4113 Plants Plants 50.8 2.52e-6   NR KAH0720957.1 4113 g29133 i0 66.7 0.514285714285714 42 10 51.4 2 104 229 21 58 KAH0720957.1 hypothetical protein KY284_005987 [Solanum tuberosum] diamond 126 50.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum tuberosum
32717496 32717496 PRJNA690234_P_NODE_11780_length_370_cov_2.013468_g11414_i0 PRJNA690234 11780 370 2.013468 7.4498316000000004 Eukaryota 2759 Plants Plants 97.1 5.4e-23   NR AFK37864.1 34305 g11414 i0 97.9 6.12162162162162 47 1 38.1 0 352 212 1 47 AFK37864.1 unknown [Lotus japonicus] diamond 2265 97.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
32780269 32780269 PRJNA690234_P_NODE_7400_length_473_cov_1.365000_g7034_i0 PRJNA690234 7400 473 1.365 6.45645 Eukaryota 2759 Plants Plants 102 1.5400000000000001e-22   NR XP_031481829.1 210225 g7034 i0 38.6 8.87949260042283 153 82 97 2 6 464 57 197 XP_031481829.1 ervatamin-B-like [Nymphaea colorata] diamond 4200 103 0.990291262135922 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Nymphaeales Nymphaeaceae Nymphaea Nymphaea colorata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;