RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA690234" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690234 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27019131 27019131 PRJNA690234_P_NODE_28502_length_247_cov_0.896552_g28135_i0 PRJNA690234 28502 247 0.896552 2.21448344 Pirellulales bacterium 2715253 Bacteria Bacteria 124 9.63e-31   NR MEX2091435.1 2715253 g28135 i0 70.7 0.995951417004049 82 24 99.6 0 2 247 275 356 MEX2091435.1 endo-1,4-beta-xylanase [Pirellulales bacterium] diamond 246 124 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
27177030 27177030 PRJNA690234_P_NODE_19922_length_284_cov_1.734597_g19555_i0 PRJNA690234 19922 284 1.734597 4.92625548 Gemmataceae bacterium 2052164 Bacteria Bacteria 54.7 3.03e-6   NR MFN4258049.1 2052164 g19555 i0 35.9 0.823943661971831 78 50 82.4 0 51 284 5 82 MFN4258049.1 tetratricopeptide repeat protein [Gemmataceae bacterium] diamond 234 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
27714618 27714618 PRJNA690234_P_NODE_26824_length_250_cov_0.881356_g26457_i0 PRJNA690234 26824 250 0.881356 2.20339 Planctomyces sp. 37635 Bacteria Bacteria 142 1.47e-39   NR MBA4029640.1 37635 g26457 i0 84.3 0.996 83 13 99.6 0 250 2 96 178 MBA4029640.1 nucleotide pyrophosphatase [Planctomyces sp.] diamond 249 142 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;