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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA690234" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690234 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5773997 5773997 PRJNA690234_P_NODE_4925_length_588_cov_4.256311_g4565_i0 PRJNA690234 4925 588 4.256311 25.02710868 Opisthokonta 33154 Nematoda Nematoda 274 1.67e-90   NR TKR68318.1 34508 g4565 i0 71.8 129.020408163265 181 51 92.3 0 580 38 38 218 TKR68318.1 hypothetical protein L596_024314 [Steinernema carpocapsae] diamond 75864 276 0.992753623188406 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
8323419 8323419 PRJNA690234_P_NODE_29267_length_246_cov_0.901734_g28900_i0 PRJNA690234 29267 246 0.901734 2.21826564 Metazoa 33208 Nematoda Nematoda 145 1.2999999999999998e-38   NR VDK47819.1 6269 g28900 i0 82.7 129.353658536585 81 14 98.8 0 3 245 424 504 VDK47819.1 unnamed protein product [Anisakis simplex] diamond 31821 146 0.993150684931507 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
9598647 9598647 PRJNA690234_P_NODE_21468_length_274_cov_1.228856_g21101_i0 PRJNA690234 21468 274 1.228856 3.36706544 Opisthokonta 33154 Nematoda Nematoda 124 2.01e-31   NR KAK6009070.1 6317 g21101 i0 66.3 15.514598540146 89 30 97.4 0 271 5 1 89 KAK6009070.1 monothiol glutaredoxin, Grx4 family [Ostertagia ostertagi] diamond 4251 125 0.992 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
15973148 15973148 PRJNA690234_P_NODE_4133_length_647_cov_3.017422_g3778_i0 PRJNA690234 4133 647 3.017422 19.52272034 Metazoa 33208 Nematoda Nematoda 347 9.749999999999997e-119   NR VDK67687.1 6269 g3778 i0 78.6 63.5378670788254 206 44 95.5 0 618 1 33 238 VDK67687.1 unnamed protein product [Anisakis simplex] diamond 41109 349 0.994269340974212 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
19796925 19796925 PRJNA690234_P_NODE_14896_length_329_cov_1.523438_g14529_i0 PRJNA690234 14896 329 1.523438 5.01211102 Metazoa 33208 Nematoda Nematoda 120 1.97e-29   NR KRY36820.1 6334 g14529 i0 56.5 7.87841945288754 108 46 98.5 1 6 329 318 424 KRY36820.1 Aldehyde dehydrogenase, dimeric NADP-preferring [Trichinella spiralis] diamond 2592 120 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
26607383 26607383 PRJNA690234_P_NODE_18441_length_295_cov_1.405405_g18074_i0 PRJNA690234 18441 295 1.405405 4.14594475 Pristionchus mayeri 1317129 Nematoda Nematoda 147 7.299999999999998e-41   NR GMR60996.1 1317129 g18074 i0 65.6 43.6677966101695 96 33 97.6 0 293 6 3 98 GMR60996.1 hypothetical protein PMAYCL1PPCAC_31191 [Pristionchus mayeri] diamond 12882 147 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus mayeri
27019128 27019128 PRJNA690234_P_NODE_25162_length_253_cov_0.866667_g24795_i0 PRJNA690234 25162 253 0.866667 2.19266751 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 112 1.5500000000000002e-26   NR CAD6195704.1 2777116 g24795 i0 58.4 9.48616600790514 89 32 99.6 2 252 1 328 416 CAD6195704.1 unnamed protein product [Caenorhabditis auriculariae] diamond 2400 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
27145186 27145186 PRJNA690234_P_NODE_32342_length_235_cov_3.234568_g31975_i0 PRJNA690234 32342 235 3.234568 7.6012348 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 53.5 5.27e-6   NR KAE9556226.1 2598192 g31975 i0 40 0.765957446808511 60 36 76.6 0 199 20 11 70 KAE9556226.1 hypothetical protein FO519_000565 [Halicephalobus sp. NKZ332] diamond 180 53.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27220043 27220043 PRJNA690234_P_NODE_19122_length_290_cov_1.078341_g18755_i0 PRJNA690234 19122 290 1.078341 3.1271889 Metazoa 33208 Nematoda Nematoda 190 9.26e-57   NR VBB26875.1 6277 g18755 i0 96.9 445.903448275862 96 3 99.3 0 1 288 237 332 VBB26875.1 unnamed protein product [Acanthocheilonema viteae] diamond 129312 190 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
27272031 27272031 PRJNA690234_P_NODE_26343_length_251_cov_0.876404_g25976_i0 PRJNA690234 26343 251 0.876404 2.19977404 Pristionchus pacificus 54126 Nematoda Nematoda 67 1.19e-10   NR KAF8371143.1 54126 g25976 i0 61.4 2.10358565737052 44 17 52.6 0 250 119 1730 1773 KAF8371143.1 mask-1, partial [Pristionchus pacificus] diamond 528 67 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
27303789 27303789 PRJNA690234_P_NODE_22723_length_266_cov_1.616580_g22356_i0 PRJNA690234 22723 266 1.61658 4.3001028 Diploscapter pachys 2018661 Nematoda Nematoda 56.2 2.33e-7   NR PAV82248.1 2018661 g22356 i0 38.1 1.81578947368421 84 48 90.2 2 3 242 4 87 PAV82248.1 hypothetical protein WR25_24504 [Diploscapter pachys] diamond 483 56.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
27473075 27473075 PRJNA690234_P_NODE_4243_length_638_cov_1.608850_g3886_i0 PRJNA690234 4243 638 1.60885 10.264463 Rhabditida 6236 Nematoda Nematoda 285 1.09e-84   NR CDJ89831.1 6289 g3886 i0 64.9 15.8746081504702 211 74 99.2 0 633 1 473 683 CDJ89831.1 Aminoacyl-tRNA synthetase and Valyl Leucyl Isoleucyl-tRNA synthetase and Mitochondrial substrate solute carrier and Small-subunit processome and Transcription factor E2F dimerisation partner (TDP) domain containing protein [Haemonchus contortus] diamond 10128 286 0.996503496503496 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
27536269 27536269 PRJNA690234_P_NODE_21663_length_273_cov_0.935000_g21296_i0 PRJNA690234 21663 273 0.935 2.55255 Metazoa 33208 Nematoda Nematoda 125 6.109999999999999e-31   NR RCN47064.1 29170 g21296 i0 67.8 20.7692307692308 90 29 98.9 0 2 271 516 605 RCN47064.1 dynamin family protein [Ancylostoma caninum] diamond 5670 126 0.992063492063492 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
27619575 27619575 PRJNA690234_P_NODE_19924_length_284_cov_1.649289_g19557_i0 PRJNA690234 19924 284 1.649289 4.68398076 Haemonchus contortus 6289 Nematoda Nematoda 60.8 2.48e-9   NR XGW24735.1 6289 g19557 i0 41.7 0.887323943661972 84 43 82.4 2 5 238 10 93 XGW24735.1 hypothetical protein V3C99_006302 [Haemonchus contortus] diamond 252 60.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
27619586 27619586 PRJNA690234_P_NODE_8744_length_434_cov_1.512465_g8378_i0 PRJNA690234 8744 434 1.512465 6.5640981 Trichinella nativa 6335 Nematoda Nematoda 83.6 1.14e-15   NR OUC39547.1 6335 g8378 i0 33.1 0.981566820276498 142 67 98.2 1 2 427 184 297 OUC39547.1 WD domain, G-beta repeat protein [Trichinella nativa] diamond 426 83.6 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nativa
28093062 28093062 PRJNA690234_P_NODE_26085_length_251_cov_1.685393_g25718_i0 PRJNA690234 26085 251 1.685393 4.23033643 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 96.7 4.31e-22   NR CAD6188629.1 2777116 g25718 i0 65.1 0.752988047808765 63 22 75.3 0 8 196 178 240 CAD6188629.1 unnamed protein product [Caenorhabditis auriculariae] diamond 189 96.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
28925343 28925343 PRJNA690234_P_NODE_6268_length_517_cov_1.578829_g5903_i0 PRJNA690234 6268 517 1.578829 8.16254593 Metazoa 33208 Nematoda Nematoda 99 1.52e-20   NR MFH4981174.1 75299 g5903 i0 32.1 8.77949709864603 196 104 98.1 3 509 3 310 503 MFH4981174.1 hypothetical protein [Gnathostoma spinigerum] diamond 4539 99 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gnathostomatidae Gnathostoma Gnathostoma spinigerum
29430405 29430405 PRJNA690234_P_NODE_20129_length_283_cov_1.195238_g19762_i0 PRJNA690234 20129 283 1.195238 3.38252354 Opisthokonta 33154 Nematoda Nematoda 45.8 0.00473   NR CAD5210093.1 465554 g19762 i0 54.8 0.69964664310954106 31 14 32.9 0 2 94 85 115 CAD5210093.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 198 45.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
29766371 29766371 PRJNA690234_P_NODE_19311_length_288_cov_2.093023_g18944_i0 PRJNA690234 19311 288 2.093023 6.02790624 Ditylenchus destructor 166010 Nematoda Nematoda 43.9 0.0237   NR KAI1720284.1 166010 g18944 i0 33.3 0.9375 90 45 91.7 3 280 17 222 298 KAI1720284.1 nucleotidyl transferase domain-containing protein [Ditylenchus destructor] diamond 270 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
29829596 29829596 PRJNA690234_P_NODE_10551_length_392_cov_4.420063_g10185_i0 PRJNA690234 10551 392 4.420063 17.32664696 Caenorhabditis remanei 31234 Nematoda Nematoda 67 6.05e-10   NR XP_053586960.1 31234 g10185 i0 42.3 3.38265306122449 104 52 79.6 1 319 8 11 106 XP_053586960.1 hypothetical protein GCK72_009439 [Caenorhabditis remanei] diamond 1326 67 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
29924531 29924531 PRJNA690234_P_NODE_20411_length_281_cov_1.125000_g20044_i0 PRJNA690234 20411 281 1.125 3.16125 Toxocara canis 6265 Nematoda Nematoda 58.9 1.16e-7   NR KHN84092.1 6265 g20044 i0 41 2.56227758007117 78 45 82.2 1 233 3 13 90 KHN84092.1 Nitrilase and fragile histidine triad fusion protein NitFhit [Toxocara canis] diamond 720 58.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
30030747 30030747 PRJNA690234_P_NODE_9151_length_423_cov_1.180000_g8785_i0 PRJNA690234 9151 423 1.18 4.9914 Metazoa 33208 Nematoda Nematoda 109 8.07e-26   NR CAK5043706.1 390850 g8785 i0 44.4 4.31914893617021 133 68 94.3 1 25 423 35 161 CAK5043706.1 unnamed protein product [Meloidogyne enterolobii] diamond 1827 109 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
30113908 30113908 PRJNA690234_P_NODE_24992_length_253_cov_1.300000_g24625_i0 PRJNA690234 24992 253 1.3 3.289 Pristionchus pacificus 54126 Nematoda Nematoda 82 6.12e-16   NR KAF8360962.1 54126 g24625 i0 51.5 0.806324110671937 68 33 80.6 0 206 3 8 75 KAF8360962.1 hypothetical protein PRIPAC_87885 [Pristionchus pacificus] diamond 204 82 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
30694148 30694148 PRJNA690234_P_NODE_16393_length_314_cov_1.294606_g16026_i0 PRJNA690234 16393 314 1.294606 4.06506284 Metazoa 33208 Nematoda Nematoda 82.4 1.03e-15   NR KAI3415712.1 36090 g16026 i0 44 8.82802547770701 84 47 80.3 0 61 312 2 85 KAI3415712.1 hypothetical protein GPALN_005301 [Globodera pallida] diamond 2772 82.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
30809091 30809091 PRJNA690234_P_NODE_25194_length_253_cov_0.866667_g24827_i0 PRJNA690234 25194 253 0.866667 2.19266751 Loa loa 7209 Nematoda Nematoda 67.4 8.5e-11   NR XP_003144636.1 7209 g24827 i0 41.4 1.9802371541502 87 46 97.2 2 253 8 179 265 XP_003144636.1 hypothetical protein LOAG_09059 [Loa loa] diamond 501 67.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
31536337 31536337 PRJNA690234_P_NODE_29876_length_245_cov_0.906977_g29509_i0 PRJNA690234 29876 245 0.906977 2.22209365 Dirofilaria immitis 6287 Nematoda Nematoda 65.9 2.79e-10   NR MCP9262308.1 6287 g29509 i0 46.9 7.91020408163265 64 33 78.4 1 47 238 472 534 MCP9262308.1 5'-3' exoribonuclease 1 [Dirofilaria immitis] diamond 1938 65.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
32137265 32137265 PRJNA690234_P_NODE_30898_length_243_cov_1.376471_g30531_i0 PRJNA690234 30898 243 1.376471 3.34482453 Pristionchus pacificus 54126 Nematoda Nematoda 79 4.44e-15   NR KAF8357145.1 54126 g30531 i0 54.2 1.77777777777778 72 32 87.7 1 19 231 102 173 KAF8357145.1 npp-18 [Pristionchus pacificus] diamond 432 79 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
32622928 32622928 PRJNA690234_P_NODE_25280_length_253_cov_0.866667_g24913_i0 PRJNA690234 25280 253 0.866667 2.19266751 Caenorhabditis 6237 Nematoda Nematoda 50.8 5.92e-5   NR CAI5442304.1 860376 g24913 i0 57.9 1.35177865612648 38 16 45.1 0 128 241 521 558 CAI5442304.1 unnamed protein product [Caenorhabditis angaria] diamond 342 50.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
32811893 32811893 PRJNA690234_P_NODE_11860_length_369_cov_0.918919_g11493_i0 PRJNA690234 11860 369 0.918919 3.39081111 Metazoa 33208 Nematoda Nematoda 134 1.22e-33   NR KRY66809.1 6337 g11493 i0 52.8 10 123 57 100 1 1 369 152 273 KRY66809.1 DNA excision repair protein ERCC-6, partial [Trichinella pseudospiralis] diamond 3690 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;