RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA690234" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690234 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31642325 31642325 PRJNA690234_P_NODE_3096_length_748_cov_2.681481_g2759_i0 PRJNA690234 3096 748 2.681481 20.05747788 Fungi 4751 Fungi Fungi 98.6 2.13e-19   NR KDE07049.1 683840 g2759 i0 36.7 1.8168449197861 147 85 56.1 3 424 5 522 667 KDE07049.1 hypothetical protein MVLG_02625 [Microbotryum lychnidis-dioicae p1A1 Lamole] diamond 1359 98.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Microbotryales Microbotryaceae Microbotryum Microbotryum lychnidis-dioicae
32243924 32243924 PRJNA690234_P_NODE_24838_length_254_cov_1.149171_g24471_i0 PRJNA690234 24838 254 1.149171 2.91889434 Eukaryota 2759 Fungi Fungi 74.3 3.17e-13   NR KZO91950.1 1330018 g24471 i0 43.7 3.07086614173228 87 44 96.9 2 3 248 108 194 KZO91950.1 P-loop containing nucleoside triphosphate hydrolase protein [Calocera viscosa TUFC12733] diamond 780 74.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Dacrymycetes Dacrymycetales Dacrymycetaceae Calocera Calocera viscosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;