RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA690234" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690234 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26670612 26670612 PRJNA690234_P_NODE_28341_length_247_cov_1.764368_g27974_i0 PRJNA690234 28341 247 1.764368 4.35798896 Ascodesmis nigricans 341454 Fungi Fungi 57.4 2.16e-7   NR TGZ82176.1 341454 g27974 i0 47.8 2.59919028340081 69 35 83.8 1 3 209 16 83 TGZ82176.1 TIP41-domain-containing protein [Ascodesmis nigricans] diamond 642 57.4 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Ascodesmidaceae Ascodesmis Ascodesmis nigricans
26733836 26733836 PRJNA690234_P_NODE_4401_length_625_cov_1.597826_g4042_i0 PRJNA690234 4401 625 1.597826 9.9864125 Metschnikowia pulcherrima 27326 Fungi Fungi 87.4 5.34e-16   NR KAF8002457.1 27326 g4042 i0 43.3 0.432 90 51 43.2 0 2 271 132 221 KAF8002457.1 hypothetical protein HF325_003422 [Metschnikowia pulcherrima] diamond 270 87.4 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Metschnikowia Metschnikowia pulcherrima
28282325 28282325 PRJNA690234_P_NODE_7086_length_484_cov_1.333333_g6720_i0 PRJNA690234 7086 484 1.333333 6.45333172 [Candida] jaroonii 467808 Fungi Fungi 98.2 2.31e-22   NR CAH6719291.1 467808 g6720 i0 41.6 1.8904958677686 101 58 62.6 1 311 9 29 128 CAH6719291.1 NEDD8-conjugating enzyme Ubc12p [[Candida] jaroonii] diamond 915 98.2 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Yamadazyma [Candida] jaroonii
28293862 28293862 PRJNA690234_P_NODE_24466_length_256_cov_1.278689_g24099_i0 PRJNA690234 24466 256 1.278689 3.27344384 Opisthokonta 33154 Fungi Fungi 65.1 5.99e-10   NR XP_011277251.1 1041607 g24099 i0 38.8 3.9375 80 49 93.8 0 1 240 489 568 XP_011277251.1 uncharacterized protein BN7_391 [Wickerhamomyces ciferrii] diamond 1008 65.1 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Wickerhamomycetaceae Wickerhamomyces Wickerhamomyces ciferrii
28704585 28704585 PRJNA690234_P_NODE_30987_length_243_cov_0.917647_g30620_i0 PRJNA690234 30987 243 0.917647 2.22988221 Aspergillaceae 1131492 Fungi Fungi 104 1.0999999999999998e-24   NR KAF4157850.1 293939 g30620 i0 88.2 5.11111111111111 51 6 63 0 6 158 280 330 KAF4157850.1 hypothetical protein CNMCM6069_004933 [Aspergillus lentulus] diamond 1242 105 0.990476190476191 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus lentulus
28882355 28882355 PRJNA690234_P_NODE_5888_length_533_cov_5.397826_g5525_i0 PRJNA690234 5888 533 5.397826 28.77041258 Hanseniaspora osmophila 56408 Fungi Fungi 195 1.5e-60   NR OEJ86052.1 56408 g5525 i0 60.8 9.21388367729831 148 58 83.3 0 37 480 7 154 OEJ86052.1 Nucleoside diphosphate kinase [Hanseniaspora osmophila] diamond 4911 195 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycodales Saccharomycodaceae Hanseniaspora Hanseniaspora osmophila
28925342 28925342 PRJNA690234_P_NODE_5408_length_559_cov_2.744856_g5045_i0 PRJNA690234 5408 559 2.744856 15.34374504 root 1 Root_unresolved Root_unresolved 48.9 0.0052   NR CAF9921102.1 1940652 g5045 i0 31.4 0.912343470483005 102 63 54.7 2 227 532 270 364 CAF9921102.1 MAG: hypothetical protein GOMPHAMPRED_002229 [Gomphillus americanus] diamond 510 48.9 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Ostropales Graphidaceae Gomphillus Gomphillus americanus
29261124 29261124 PRJNA690234_P_NODE_15569_length_322_cov_1.253012_g15202_i0 PRJNA690234 15569 322 1.253012 4.03469864 Spathaspora sp. JA1 2028339 Fungi Fungi 57 9.04e-7   NR RLV90187.1 2028339 g15202 i0 33 1.01552795031056 109 67 98.8 3 1 318 189 294 RLV90187.1 NADH dehydrogenase ubiquinone complex I assembly factor 7 [Spathaspora sp. JA1] diamond 327 57 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Spathaspora Spathaspora sp. JA1
29924525 29924525 PRJNA690234_P_NODE_11211_length_380_cov_1.296417_g10845_i0 PRJNA690234 11211 380 1.296417 4.9263846 Komagataella phaffii GS115 644223 Fungi Fungi 46.2 0.00895   NR XP_002489962.1 644223 g10845 i0 38.6 0.907894736842105 57 34 45 1 173 3 66 121 XP_002489962.1 uncharacterized protein PAS_chr1-1_0304 [Komagataella phaffii GS115] diamond 345 46.2 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Komagataella Komagataella phaffii
30536166 30536166 PRJNA690234_P_NODE_32153_length_239_cov_12.873494_g31786_i0 PRJNA690234 32153 239 12.873494 30.76765066 Eukaryota 2759 Fungi Fungi 92.8 1.22e-22   NR XP_047761105.1 5499 g31786 i0 66.2 16.2050209205021 68 23 85.4 0 22 225 1 68 XP_047761105.1 60S ribosomal protein L38 [Fulvia fulva] diamond 3873 93.2 0.995708154506438 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Fulvia Fulvia fulva
31504677 31504677 PRJNA690234_P_NODE_8296_length_445_cov_2.801075_g7930_i0 PRJNA690234 8296 445 2.801075 12.46478375 Pneumocystis sp. 'macacae' 2698480 Fungi Fungi 79 6.55e-14   NR KAG5519159.1 2698480 g7930 i0 48.8 0.950561797752809 84 41 56.6 2 254 3 43 124 KAG5519159.1 hypothetical protein PMAC_002247 [Pneumocystis sp. 'macacae'] diamond 423 79 1 Eukaryota Opisthokonta Fungi Ascomycota Pneumocystomycetes Pneumocystales Pneumocystaceae Pneumocystis Pneumocystis sp. 'macacae'
31768946 31768946 PRJNA690234_P_NODE_19117_length_290_cov_1.078341_g18750_i0 PRJNA690234 19117 290 1.078341 3.1271889 Opisthokonta 33154 Fungi Fungi 75.9 1.29e-14   NR XP_025339803.1 45357 g18750 i0 46.4 5.04827586206897 97 47 95.2 1 2 277 31 127 XP_025339803.1 hypothetical protein CXQ85_001153 [Candidozyma haemuli] diamond 1464 75.9 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Candidozyma Candidozyma haemuli
32200544 32200544 PRJNA690234_P_NODE_7938_length_456_cov_1.091384_g7572_i0 PRJNA690234 7938 456 1.091384 4.97671104 Rasamsonia emersonii CBS 393.64 1408163 Fungi Fungi 69.7 1.52e-10   NR XP_013327271.1 1408163 g7572 i0 33.1 3.19736842105263 121 69 79.6 2 449 87 1366 1474 XP_013327271.1 Rho GTPase activator (Bem3) [Rasamsonia emersonii CBS 393.64] diamond 1458 69.7 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae Rasamsonia Rasamsonia emersonii
32295762 32295762 PRJNA690234_P_NODE_24699_length_254_cov_3.701657_g24332_i0 PRJNA690234 24699 254 3.701657 9.40220878 Saccharomycopsis crataegensis 43959 Fungi Fungi 75.1 1.72e-13   NR XP_064851041.1 43959 g24332 i0 48.6 6.16535433070866 70 35 82.7 1 243 34 268 336 XP_064851041.1 protein phosphatase 2A regulatory subunit RTS1 [Saccharomycopsis crataegensis] diamond 1566 75.1 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Ascoideales Saccharomycopsidaceae Saccharomycopsis Saccharomycopsis crataegensis
32307187 32307187 PRJNA690234_P_NODE_21219_length_275_cov_1.925743_g20852_i0 PRJNA690234 21219 275 1.925743 5.29579325 Ascomycota 4890 Fungi Fungi 44.3 0.0152   NR KAL3955720.1 33203 g20852 i0 46.5 5.18181818181818 43 23 46.9 0 134 6 39 81 KAL3955720.1 hypothetical protein ACCO45_011283 [Purpureocillium lilacinum] diamond 1425 44.7 0.991051454138702 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Ophiocordycipitaceae Purpureocillium Purpureocillium lilacinum
32465224 32465224 PRJNA690234_P_NODE_25719_length_252_cov_0.871508_g25352_i0 PRJNA690234 25719 252 0.871508 2.19620016 root 1 Root_unresolved Root_unresolved 119 4.79e-31   NR KAF3927184.1 47266 g25352 i0 61.4 26.7261904761905 83 32 98.8 0 249 1 168 250 KAF3927184.1 hypothetical protein ABW20_dc0103557 [Dactylellina cionopaga] diamond 6735 120 0.991666666666667 Eukaryota Opisthokonta Fungi Ascomycota Orbiliomycetes Orbiliales Orbiliaceae Dactylellina Dactylellina cionopaga

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;