contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA690234" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26861221 | 26861221 | PRJNA690234_P_NODE_25461_length_252_cov_1.743017_g25094_i0 | PRJNA690234 | 25461 | 252 | 1.743017 | 4.39240284 | Flavobacteriales bacterium | 2021391 | Bacteria | Bacteria | 136 | 3.36e-36 | NR | MFI5203427.1 | 2021391 | g25094 | i0 | 75 | 32.7738095238095 | 84 | 21 | 100 | 0 | 252 | 1 | 245 | 328 | MFI5203427.1 ornithine--oxo-acid transaminase [Flavobacteriales bacterium] | diamond | 8259 | 136 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriales bacterium | |||
| 27335409 | 27335409 | PRJNA690234_P_NODE_6043_length_526_cov_20.041943_g5679_i0 | PRJNA690234 | 6043 | 526 | 20.041943 | 105.42062018 | Candidatus Aegiribacteria sp. | 2528271 | Bacteria | Bacteria | 94.7 | 5.88e-22 | NR | MFO8183585.1 | 2528271 | g5679 | i0 | 57.7 | 1.39733840304182 | 78 | 33 | 44.5 | 0 | 505 | 272 | 2 | 79 | MFO8183585.1 RNA-binding protein [Candidatus Aegiribacteria sp.] | diamond | 735 | 94.7 | 1 | Bacteria | FCB group | Pseudomonadati | Candidatus Aegiribacteria | Candidatus Aegiribacteria sp. | |||||
| 27430268 | 27430268 | PRJNA690234_P_NODE_10703_length_390_cov_1.637224_g10337_i0 | PRJNA690234 | 10703 | 390 | 1.637224 | 6.3851736 | Flavobacteriales bacterium | 2021391 | Bacteria | Bacteria | 44.3 | 0.0444 | NR | MBI34595.1 | 2021391 | g10337 | i0 | 32.4 | 0.569230769230769 | 74 | 47 | 56.9 | 1 | 228 | 7 | 118 | 188 | MBI34595.1 hypothetical protein [Flavobacteriales bacterium] | diamond | 222 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriales bacterium | |||
| 27682961 | 27682961 | PRJNA690234_P_NODE_2024_length_929_cov_5.154206_g1746_i0 | PRJNA690234 | 2024 | 929 | 5.154206 | 47.88257374 | Yeosuana aromativorans | 288019 | Bacteria | Bacteria | 52.8 | 4.14e-4 | NR | WP_188650315.1 | 288019 | g1746 | i0 | 26.8 | 0.67491926803014 | 209 | 131 | 62.3 | 6 | 859 | 281 | 9 | 211 | WP_188650315.1 LolA family protein [Yeosuana aromativorans] | diamond | 627 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Yeosuana | Yeosuana aromativorans | |
| 27883445 | 27883445 | PRJNA690234_P_NODE_23765_length_260_cov_1.363636_g23398_i0 | PRJNA690234 | 23765 | 260 | 1.363636 | 3.5454536 | FCB group | 1783270 | Bacteria | Bacteria | 67.8 | 6.88e-11 | NR | MFT5210989.1 | 239 | g23398 | i0 | 48.2 | 10.4884615384615 | 85 | 43 | 98.1 | 1 | 256 | 2 | 196 | 279 | MFT5210989.1 choline dehydrogenase-like flavoprotein [Flavobacterium sp.] | diamond | 2727 | 67.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. | |
| 27883446 | 27883446 | PRJNA690234_P_NODE_25405_length_253_cov_0.866667_g25038_i0 | PRJNA690234 | 25405 | 253 | 0.866667 | 2.19266751 | Flavobacteriales | 200644 | Bacteria | Bacteria | 58.2 | 1.44e-7 | NR | HEY6143543.1 | 239 | g25038 | i0 | 82.4 | 3.61660079051383 | 34 | 6 | 40.3 | 0 | 152 | 253 | 1 | 34 | HEY6143543.1 acyltransferase family protein [Flavobacterium sp.] | diamond | 915 | 58.2 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. | |
| 30082240 | 30082240 | PRJNA690234_P_NODE_27892_length_248_cov_1.337143_g27525_i0 | PRJNA690234 | 27892 | 248 | 1.337143 | 3.31611464 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 61.6 | 7.29e-9 | NR | MCX7953585.1 | 2030927 | g27525 | i0 | 46.6 | 2.84274193548387 | 58 | 31 | 70.2 | 0 | 73 | 246 | 22 | 79 | MCX7953585.1 NAD-dependent epimerase/dehydratase family protein [Bacteroidales bacterium] | diamond | 705 | 61.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 30461978 | 30461978 | PRJNA690234_P_NODE_22333_length_268_cov_2.507692_g21966_i0 | PRJNA690234 | 22333 | 268 | 2.507692 | 6.72061456 | Parafilimonas sp. | 1969739 | Bacteria | Bacteria | 89.4 | 1.03e-18 | NR | HYK45670.1 | 1969739 | g21966 | i0 | 50.6 | 0.951492537313433 | 85 | 42 | 95.1 | 0 | 268 | 14 | 35 | 119 | HYK45670.1 HesA/MoeB/ThiF family protein [Parafilimonas sp.] | diamond | 255 | 89.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Parafilimonas | Parafilimonas sp. | |
| 30650848 | 30650848 | PRJNA690234_P_NODE_12173_length_363_cov_1.851724_g11806_i0 | PRJNA690234 | 12173 | 363 | 1.851724 | 6.72175812 | Lacibacter sp. | 1915409 | Bacteria | Bacteria | 47 | 0.00307 | NR | WP_324232586.1 | 1915409 | g11806 | i0 | 31.9 | 0.776859504132231 | 94 | 63 | 76.9 | 1 | 44 | 322 | 3 | 96 | WP_324232586.1 hypothetical protein [Lacibacter sp.] | diamond | 282 | 47 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Lacibacter | Lacibacter sp. | |
| 30650851 | 30650851 | PRJNA690234_P_NODE_16013_length_318_cov_0.918367_g15646_i0 | PRJNA690234 | 16013 | 318 | 0.918367 | 2.92040706 | Bacteroidia bacterium | 2044936 | Bacteria | Bacteria | 43.5 | 0.0474 | NR | MEI8115686.1 | 2044936 | g15646 | i0 | 36.1 | 0.575471698113208 | 61 | 36 | 57.5 | 1 | 119 | 301 | 621 | 678 | MEI8115686.1 Ig-like domain-containing protein [Bacteroidia bacterium] | diamond | 183 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidia bacterium | ||||
| 31314721 | 31314721 | PRJNA690234_P_NODE_22895_length_265_cov_1.625000_g22528_i0 | PRJNA690234 | 22895 | 265 | 1.625 | 4.30625 | Weeksellaceae bacterium A-14 | 3143028 | Bacteria | Bacteria | 42.4 | 0.0473 | NR | MEN2436866.1 | 3143028 | g22528 | i0 | 34.8 | 1.00754716981132 | 89 | 50 | 95.1 | 2 | 263 | 12 | 92 | 177 | MEN2436866.1 hypothetical protein [Weeksellaceae bacterium A-14] | diamond | 267 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Weeksellaceae bacterium A-14 | ||
| 31441174 | 31441174 | PRJNA690234_P_NODE_26296_length_251_cov_0.876404_g25929_i0 | PRJNA690234 | 26296 | 251 | 0.876404 | 2.19977404 | Kaistella carnis | 1241979 | Bacteria | Bacteria | 126 | 1.7399999999999999e-31 | NR | WP_312820434.1 | 1241979 | g25929 | i0 | 75.9 | 0.99203187250996006 | 83 | 20 | 99.2 | 0 | 250 | 2 | 175 | 257 | WP_312820434.1 UvrD-helicase domain-containing protein [Kaistella carnis] | diamond | 249 | 126 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Kaistella | Kaistella carnis | |
| 31757531 | 31757531 | PRJNA690234_P_NODE_21197_length_275_cov_2.361386_g20830_i0 | PRJNA690234 | 21197 | 275 | 2.361386 | 6.4938115 | Salibacteraceae bacterium | 2832350 | Bacteria | Bacteria | 52.4 | 2.11e-5 | NR | MDC1222222.1 | 2832350 | g20830 | i0 | 41 | 2.07272727272727 | 61 | 35 | 65.5 | 1 | 94 | 273 | 2 | 62 | MDC1222222.1 DnaJ domain-containing protein [Salibacteraceae bacterium] | diamond | 570 | 52.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Salibacteraceae | Salibacteraceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;