RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA690124" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690124 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26607364 26607364 PRJNA690124_P_NODE_31481_length_295_cov_1.405405_g31115_i0 PRJNA690124 31481 295 1.405405 4.14594475 Gongronella butleri 101105 Fungi Fungi 47.4 0.00157   NR KAI8067099.1 101105 g31115 i0 45.3 1.05762711864407 53 29 53.9 0 91 249 42 94 KAI8067099.1 hypothetical protein BC940DRAFT_274291 [Gongronella butleri] diamond 312 47.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Gongronella Gongronella butleri
27694362 27694362 PRJNA690124_P_NODE_20924_length_355_cov_2.450355_g20558_i0 PRJNA690124 20924 355 2.450355 8.69876025 Opisthokonta 33154 Fungi Fungi 114 2.97e-29   NR XP_069242933.1 4840 g20558 i0 47 139.935211267606 115 61 97.2 0 9 353 48 162 XP_069242933.1 uncharacterized protein VTP01DRAFT_6560 [Rhizomucor pusillus] diamond 49677 114 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
28925337 28925337 PRJNA690124_P_NODE_19068_length_371_cov_2.093960_g18702_i0 PRJNA690124 19068 371 2.09396 7.7685916 Eukaryota 2759 Fungi Fungi 80.9 2.49e-15   NR CEP12463.1 35722 g18702 i0 43.5 3.41239892183288 115 58 88.9 3 330 1 106 218 CEP12463.1 hypothetical protein [Parasitella parasitica] diamond 1266 81.6 0.991421568627451 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;