RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA690124" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA690124 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27726043 27726043 PRJNA690124_P_NODE_51324_length_246_cov_0.901734_g50958_i0 PRJNA690124 51324 246 0.901734 2.21826564 Bacillati 1783272 Bacteria Bacteria 54.3 3.07e-6   NR MFT4572375.1 2838779 g50958 i0 46.7 3.59756097560976 45 24 54.9 0 244 110 334 378 MFT4572375.1 hypothetical protein [Candidatus Binatia bacterium] diamond 885 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30650841 30650841 PRJNA690124_P_NODE_54833_length_243_cov_0.917647_g54467_i0 PRJNA690124 54833 243 0.917647 2.22988221 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 167 1.08e-48   NR HEU4339964.1 2838779 g54467 i0 97.5 0.987654320987654 80 2 98.8 0 2 241 214 293 HEU4339964.1 hypothetical protein [Candidatus Binatia bacterium] diamond 240 167 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31567984 31567984 PRJNA690124_P_NODE_33156_length_288_cov_1.437209_g32790_i0 PRJNA690124 33156 288 1.437209 4.13916192 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 132 9.439999999999999e-35   NR HEX5019841.1 2838779 g32790 i0 86.3 0.760416666666667 73 10 76 0 70 288 1 73 HEX5019841.1 transglutaminase domain-containing protein [Candidatus Binatia bacterium] diamond 219 132 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32264034 32264034 PRJNA690124_P_NODE_43198_length_253_cov_0.866667_g42832_i0 PRJNA690124 43198 253 0.866667 2.19266751 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 170 1.11e-50   NR HET8564646.1 2838779 g42832 i0 96.4 0.99604743083004 84 3 99.6 0 253 2 180 263 HET8564646.1 alpha/beta hydrolase [Candidatus Binatia bacterium] diamond 252 170 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;