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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA690124" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 11 ✖

bioproject 1

  • PRJNA690124 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19796065 19796065 PRJNA690124_P_NODE_28836_length_308_cov_0.995745_g28470_i0 PRJNA690124 28836 308 0.995745 3.0668946 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 183 3.389999999999999e-55   NR MBN1467623.1 2053555 g28470 i0 87.3 1.98701298701299 102 13 99.4 0 1 306 90 191 MBN1467623.1 acetyl-CoA carboxylase carboxyltransferase subunit alpha [Fusobacteriaceae bacterium] diamond 612 183 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
26797539 26797539 PRJNA690124_P_NODE_48961_length_248_cov_0.891429_g48595_i0 PRJNA690124 48961 248 0.891429 2.21074392 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 158 2.07e-45   NR MBU9917578.1 2053555 g48595 i0 100 0.991935483870968 82 0 99.2 0 247 2 11 92 MBU9917578.1 flagellar hook-associated protein FlgL [Fusobacteriaceae bacterium] diamond 246 158 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
28124675 28124675 PRJNA690124_P_NODE_36745_length_274_cov_2.044776_g36379_i0 PRJNA690124 36745 274 2.044776 5.60268624 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 141 2.59e-38   NR MBP9596619.1 2053555 g36379 i0 72.5 0.996350364963504 91 25 99.6 0 274 2 54 144 MBP9596619.1 SAM-dependent methyltransferase [Fusobacteriaceae bacterium] diamond 273 141 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
29734606 29734606 PRJNA690124_P_NODE_47990_length_249_cov_0.886364_g47624_i0 PRJNA690124 47990 249 0.886364 2.20704636 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 80.1 2.78e-15   NR MBP6468074.1 2053555 g47624 i0 47.5 0.963855421686747 80 42 96.4 0 241 2 263 342 MBP6468074.1 Hpt domain-containing protein [Fusobacteriaceae bacterium] diamond 240 80.1 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
30019361 30019361 PRJNA690124_P_NODE_32231_length_292_cov_1.068493_g31865_i0 PRJNA690124 32231 292 1.068493 3.11999956 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 191 9.949999999999996e-55   NR MBN1467362.1 2053555 g31865 i0 88.7 0.996575342465753 97 11 99.7 0 2 292 560 656 MBN1467362.1 anaerobic ribonucleoside triphosphate reductase [Fusobacteriaceae bacterium] diamond 291 191 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
30682484 30682484 PRJNA690124_P_NODE_44373_length_252_cov_0.871508_g44007_i0 PRJNA690124 44373 252 0.871508 2.19620016 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 138 3.0699999999999997e-37   NR MBP9595288.1 2053555 g44007 i0 79.8 1 84 17 100 0 1 252 53 136 MBP9595288.1 class I SAM-dependent rRNA methyltransferase [Fusobacteriaceae bacterium] diamond 252 138 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
30967190 30967190 PRJNA690124_P_NODE_54834_length_243_cov_0.917647_g54468_i0 PRJNA690124 54834 243 0.917647 2.22988221 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 144 1.61e-39   NR MBU9919105.1 2053555 g54468 i0 85 1.97530864197531 80 12 98.8 0 3 242 99 178 MBU9919105.1 nitrogenase cofactor biosynthesis protein NifB [Fusobacteriaceae bacterium] diamond 480 144 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
31282964 31282964 PRJNA690124_P_NODE_32135_length_292_cov_1.392694_g31769_i0 PRJNA690124 32135 292 1.392694 4.06666648 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 187 1.6199999999999995e-55   NR MBP6407726.1 2053555 g31769 i0 97.9 0.986301369863014 96 2 98.6 0 290 3 285 380 MBP6407726.1 FAD-dependent oxidoreductase [Fusobacteriaceae bacterium] diamond 288 187 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
31378072 31378072 PRJNA690124_P_NODE_43276_length_253_cov_0.866667_g42910_i0 PRJNA690124 43276 253 0.866667 2.19266751 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 161 3.55e-46   NR MBU9917419.1 2053555 g42910 i0 100 0.99604743083004 84 0 99.6 0 253 2 63 146 MBU9917419.1 ABC transporter substrate-binding protein [Fusobacteriaceae bacterium] diamond 252 161 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium
31567996 31567996 PRJNA690124_P_NODE_50416_length_247_cov_0.896552_g50050_i0 PRJNA690124 50416 247 0.896552 2.21448344 Fusobacteriota bacterium 2060921 Bacteria Bacteria 165 1.19e-49   NR KAF0092346.1 2060921 g50050 i0 95.1 0.995951417004049 82 4 99.6 0 246 1 64 145 KAF0092346.1 MAG: L-fuculose-phosphate aldolase [Fusobacteriota bacterium] diamond 246 165 1 Bacteria   Fusobacteriati Fusobacteriota         Fusobacteriota bacterium
32642776 32642776 PRJNA690124_P_NODE_48880_length_248_cov_0.891429_g48514_i0 PRJNA690124 48880 248 0.891429 2.21074392 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 58.9 4.78e-8   NR MBP6468242.1 2053555 g48514 i0 68.2 1.06451612903226 44 14 53.2 0 117 248 6 49 MBP6468242.1 GTPase HflX [Fusobacteriaceae bacterium] diamond 264 58.9 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;