RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA689790" and tax_phylum = "Pisuviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA689790 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32421946 32421946 PRJNA689790_S_NODE_659_length_859_cov_4.099757_g596_i0 PRJNA689790 659 859 4.099757 35.21691263 Durnavirales sp. 2809355 Viruses Viruses 254 5.8e-78   NR WRQ64726.1 2809355 g596 i0 49.3 0.949941792782305 272 137 95 1 858 43 211 481 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 816 254 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
32611556 32611556 PRJNA689790_S_NODE_1540_length_533_cov_2.975806_g1439_i0 PRJNA689790 1540 533 2.975806 15.86104598 Durnavirales sp. 2809355 Viruses Viruses 161 1.1999999999999999e-43   NR WRQ64726.1 2809355 g1439 i0 49.5 1.02439024390244 182 77 97.9 5 530 9 6 180 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 546 161 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;