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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA689790" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA689790 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3219641 3219641 PRJNA689790_S_NODE_9923_length_188_cov_1.470199_g9808_i0 PRJNA689790 9923 188 1.470199 2.76397412 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 3.13e-28   NR XP_002365662.1 508771 g9808 i0 82.3 28.5478723404255 62 11 98.9 0 2 187 84 145 XP_002365662.1 proteasome regulatory subunit [Toxoplasma gondii ME49] diamond 5367 112 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
16480972 16480972 PRJNA689790_S_NODE_11053_length_179_cov_1.098592_g10938_i0 PRJNA689790 11053 179 1.098592 1.96647968 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 87.4 7.76e-19   NR XP_067926325.1 483139 g10938 i0 77.6 7.77653631284916 58 13 97.2 0 176 3 229 286 XP_067926325.1 cullin family [Cystoisospora suis] diamond 1392 88.2 0.99092970521542 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
27441726 27441726 PRJNA689790_S_NODE_3903_length_311_cov_3.237226_g3788_i0 PRJNA689790 3903 311 3.237226 10.06777286 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 134 1.4599999999999998e-37   NR XP_029215122.1 94643 g3788 i0 81.3 4.28295819935691 75 14 72.3 0 310 86 107 181 XP_029215122.1 ADP ribosylation factor ARF1 [Besnoitia besnoiti] diamond 1332 135 0.992592592592593 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
28250760 28250760 PRJNA689790_S_NODE_1966_length_465_cov_2.156542_g1854_i0 PRJNA689790 1966 465 2.156542 10.0279203 Plasmodium gonderi 77519 SAR_Eukaryotes SAR_Eukaryotes 79.7 9.64e-15   NR XP_028543962.1 77519 g1854 i0 35.9 3.38064516129032 117 63 75.5 1 399 49 46 150 XP_028543962.1 cyclin [Plasmodium gonderi] diamond 1572 79.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gonderi
28830601 28830601 PRJNA689790_S_NODE_14448_length_159_cov_1.819672_g14333_i0 PRJNA689790 14448 159 1.819672 2.89327848 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 69.7 3.51e-12   NR XP_002141206.1 441375 g14333 i0 82.5 7.52830188679245 40 7 75.5 0 158 39 408 447 XP_002141206.1 26S proteasome subunit 4, putative [Cryptosporidium muris RN66] diamond 1197 70.1 0.994293865905849 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
29178189 29178189 PRJNA689790_S_NODE_3289_length_344_cov_3.078176_g3174_i0 PRJNA689790 3289 344 3.078176 10.58892544 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 138 3.82e-38   NR XP_013336399.1 5804 g3174 i0 66.3 9.79360465116279 101 34 88.1 0 8 310 144 244 XP_013336399.1 protein transport protein Sec61 alpha subunit isoform 1, putative [Eimeria maxima] diamond 3369 138 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
29367569 29367569 PRJNA689790_S_NODE_15789_length_154_cov_1.299145_g15674_i0 PRJNA689790 15789 154 1.299145 2.0006833 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 85.9 6.69e-18   NR XP_028527098.1 5849 g15674 i0 85.7 15.2727272727273 49 7 95.5 0 152 6 1730 1778 XP_028527098.1 DNA-directed RNA polymerase II subunit RPB1, putative [Plasmodium gallinaceum] diamond 2352 86.3 0.995365005793743 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
29608210 29608210 PRJNA689790_S_NODE_13230_length_165_cov_1.500000_g13115_i0 PRJNA689790 13230 165 1.5 2.475 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 41.2 0.0314   NR OEH75208.1 88456 g13115 i0 32.1 1.92727272727273 53 36 96.4 0 163 5 23 75 OEH75208.1 p23 family protein [Cyclospora cayetanensis] diamond 318 41.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
30872193 30872193 PRJNA689790_S_NODE_5874_length_247_cov_1.666667_g5759_i0 PRJNA689790 5874 247 1.666667 4.11666749 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 58.9 7.31e-8   NR CAL7865005.1 1344799 g5759 i0 40.7 3.04858299595142 81 38 94.7 2 242 9 175 248 CAL7865005.1 unnamed protein product [Sarcocystis calchasi] diamond 753 58.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31042040 31042040 PRJNA689790_S_NODE_8055_length_208_cov_2.052632_g7940_i0 PRJNA689790 8055 208 2.052632 4.26947456 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.2e-4   NR XP_011134254.1 110365 g7940 i0 38.7 2.03365384615385 75 29 89.4 3 17 202 2650 2720 XP_011134254.1 bacterial Ig-like domain protein [Gregarina niphandrodes] diamond 423 49.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
32053691 32053691 PRJNA689790_S_NODE_14438_length_159_cov_1.909836_g14323_i0 PRJNA689790 14438 159 1.909836 3.03663924 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62 9.91e-11   NR XP_067805034.1 323732 g14323 i0 60 1.52830188679245 40 16 75.5 0 36 155 1 40 XP_067805034.1 bifunctional Thioredoxin domain/Thioredoxin-like superfamily/Thioredoxin [Babesia duncani] diamond 243 62.4 0.993589743589744 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
32654176 32654176 PRJNA689790_S_NODE_16040_length_153_cov_1.336207_g15925_i0 PRJNA689790 16040 153 1.336207 2.04439671 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 71.6 6.88e-13   NR XP_013249147.1 5801 g15925 i0 64 32.2549019607843 50 18 98 0 151 2 132 181 XP_013249147.1 polyadenylate-binding protein, putative [Eimeria acervulina] diamond 4935 72 0.994444444444444 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
32705897 32705897 PRJNA689790_S_NODE_8780_length_199_cov_2.203704_g8665_i0 PRJNA689790 8780 199 2.203704 4.38537096 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.93e-8   NR XP_012648939.1 1133968 g8665 i0 64.4 1.38693467336683 45 16 67.8 0 198 64 271 315 XP_012648939.1 ubiquilin [Babesia microti strain RI] diamond 276 59.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
32800308 32800308 PRJNA689790_S_NODE_7260_length_220_cov_1.245902_g7145_i0 PRJNA689790 7260 220 1.245902 2.7409844 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 59.7 2.39e-8   NR XP_013349452.1 44415 g7145 i0 48.5 2.61818181818182 68 35 92.7 0 218 15 73 140 XP_013349452.1 LOW QUALITY PROTEIN: CBR-FKB-6 protein, related, related [Eimeria mitis] diamond 576 59.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;