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contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA689790" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 36 ✖

bioproject 1

  • PRJNA689790 · 36 ✖

analysis 1

  • diamond · 36 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3219618 3219618 PRJNA689790_S_NODE_5703_length_251_cov_1.144860_g5588_i0 PRJNA689790 5703 251 1.14486 2.8735986 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 127 8.24e-33   NR MCE5266673.1 2026779 g5588 i0 76.8 10.792828685259 82 19 98 0 247 2 209 290 MCE5266673.1 elongation factor Tu [Planctomycetaceae bacterium] diamond 2709 127 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
3729994 3729994 PRJNA689790_S_NODE_4503_length_286_cov_1.871486_g4388_i0 PRJNA689790 4503 286 1.871486 5.35244996 Planctomycetales bacterium 1 2053591 Bacteria Bacteria 109 1.75e-25   NR QGJ68794.1 2603660 g4388 i0 58.5 1.96153846153846 94 36 96.5 2 3 278 321 413 QGJ68794.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Planctomycetales bacterium 10988] diamond 561 109 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales     Planctomycetales bacterium 10988
4496745 4496745 PRJNA689790_S_NODE_12624_length_168_cov_2.969466_g12509_i0 PRJNA689790 12624 168 2.969466 4.98870288 Methylacidimicrobium sp. AP8 2730359 Bacteria Bacteria 74.3 9.63e-14   NR WP_202214564.1 2730359 g12509 i0 66.7 0.964285714285714 54 18 96.4 0 6 167 416 469 WP_202214564.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Methylacidimicrobium sp. AP8] diamond 162 74.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota       Methylacidimicrobium Methylacidimicrobium sp. AP8
18520807 18520807 PRJNA689790_S_NODE_4415_length_289_cov_1.444444_g4300_i0 PRJNA689790 4415 289 1.444444 4.17444316 Chlamydiae bacterium CG1 2081524 Bacteria Bacteria 162 1.46e-44   NR PIS01825.1 1973935 g4300 i0 76 0.996539792387543 96 23 99.7 0 288 1 276 371 PIS01825.1 MAG: phosphoenolpyruvate carboxykinase (GTP) [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9] diamond 288 162 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9
24894903 24894903 PRJNA689790_S_NODE_12020_length_172_cov_1.444444_g11905_i0 PRJNA689790 12020 172 1.444444 2.48444368 Bacteria 2 Bacteria Bacteria 87.8 1.68e-18   NR MEP0848726.1 2026778 g11905 i0 77.2 6.94186046511628 57 12 97.7 1 3 170 210 266 MEP0848726.1 aldehyde dehydrogenase family protein [Phycisphaerae bacterium] diamond 1194 87.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
26892715 26892715 PRJNA689790_S_NODE_6681_length_230_cov_2.616580_g6566_i0 PRJNA689790 6681 230 2.61658 6.018134 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 88.2 2.17e-18   NR MBE2180553.1 2201154 g6566 i0 61.3 1.86521739130435 75 24 97.8 1 2 226 28 97 MBE2180553.1 phosphoglycerate kinase [Chthoniobacterales bacterium] diamond 429 88.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
27271961 27271961 PRJNA689790_S_NODE_10663_length_182_cov_1.337931_g10548_i0 PRJNA689790 10663 182 1.337931 2.43503442 Phycisphaerales bacterium 2052180 Bacteria Bacteria 58.5 4.42e-8   NR MCB9855559.1 2052180 g10548 i0 45.3 1.23626373626374 75 22 94 2 181 11 2032 2105 MCB9855559.1 thrombospondin type 3 repeat-containing protein [Phycisphaerales bacterium] diamond 225 58.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
27303735 27303735 PRJNA689790_S_NODE_16003_length_153_cov_1.344828_g15888_i0 PRJNA689790 16003 153 1.344828 2.05758684 Phycisphaerales bacterium 2052180 Bacteria Bacteria 81.3 2.95e-16   NR MCC6952351.1 2052180 g15888 i0 76.5 5 51 12 100 0 153 1 621 671 MCC6952351.1 aminomethyl-transferring glycine dehydrogenase [Phycisphaerales bacterium] diamond 765 81.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
27651116 27651116 PRJNA689790_S_NODE_15704_length_154_cov_1.666667_g15589_i0 PRJNA689790 15704 154 1.666667 2.56666718 Planctomycetota bacterium 2026780 Bacteria Bacteria 65.1 1.43e-10   NR MBL8723148.1 2026780 g15589 i0 63 2.64935064935065 46 17 89.6 0 2 139 378 423 MBL8723148.1 acetyl-CoA hydrolase/transferase family protein [Planctomycetota bacterium] diamond 408 65.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27662662 27662662 PRJNA689790_S_NODE_2744_length_382_cov_3.214493_g2629_i0 PRJNA689790 2744 382 3.214493 12.27936326 Bacteria 2 Bacteria Bacteria 112 7.62e-26   NR MBX3467716.1 2026780 g2629 i0 47.3 5.27748691099476 112 56 87.2 2 378 46 1988 2097 MBX3467716.1 hypothetical protein [Planctomycetota bacterium] diamond 2016 112 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27809077 27809077 PRJNA689790_S_NODE_12744_length_168_cov_1.190840_g12629_i0 PRJNA689790 12744 168 1.19084 2.0006112 Planctomycetota bacterium 2026780 Bacteria Bacteria 54.3 1.16e-6   NR MFM7561483.1 2026780 g12629 i0 58.7 1.64285714285714 46 19 82.1 0 10 147 649 694 MFM7561483.1 beta strand repeat-containing protein [Planctomycetota bacterium] diamond 276 54.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27935247 27935247 PRJNA689790_S_NODE_14325_length_160_cov_1.065041_g14210_i0 PRJNA689790 14325 160 1.065041 1.7040656 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 52.4 4.83e-6   NR MCC7192158.1 2026777 g14210 i0 49 0.95625 51 20 95.6 1 7 159 363 407 MCC7192158.1 biosynthetic-type acetolactate synthase large subunit [Phycisphaeraceae bacterium] diamond 153 52.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
28093006 28093006 PRJNA689790_S_NODE_14485_length_159_cov_1.508197_g14370_i0 PRJNA689790 14485 159 1.508197 2.39803323 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.7 0.00248   NR MAE78070.1 2026780 g14370 i0 38.5 1.9622641509434 52 29 98.1 2 157 2 1846 1894 MAE78070.1 hypothetical protein [Planctomycetota bacterium] diamond 312 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28598353 28598353 PRJNA689790_S_NODE_13367_length_164_cov_2.039370_g13252_i0 PRJNA689790 13367 164 2.03937 3.3445668 Phycisphaerales bacterium 2052180 Bacteria Bacteria 87 2.83e-19   NR MBY0307717.1 2052180 g13252 i0 71.2 0.951219512195122 52 15 95.1 0 7 162 145 196 MBY0307717.1 S10 family peptidase [Phycisphaerales bacterium] diamond 156 87 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
28767521 28767521 PRJNA689790_S_NODE_7507_length_215_cov_5.011236_g7392_i0 PRJNA689790 7507 215 5.011236 10.7741574 Planctomycetota 203682 Bacteria Bacteria 79.7 2.38e-15   NR MBE0536547.1 2026778 g7392 i0 72.5 9.99069767441861 51 14 71.2 0 213 61 499 549 MBE0536547.1 hydroxylamine reductase [Phycisphaerae bacterium] diamond 2148 80.1 0.995006242197254 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
28787470 28787470 PRJNA689790_S_NODE_16027_length_153_cov_1.344828_g15912_i0 PRJNA689790 16027 153 1.344828 2.05758684 Phycisphaerae bacterium 2026778 Bacteria Bacteria 56.2 1.81e-7   NR GDX99154.1 2026778 g15912 i0 58.5 6.35294117647059 41 17 80.4 0 1 123 14 54 GDX99154.1 hypothetical protein LBMAG48_15580 [Phycisphaerae bacterium] diamond 972 56.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
28830603 28830603 PRJNA689790_S_NODE_248_length_1816_cov_8.288926_g242_i0 PRJNA689790 248 1816 8.288926 150.52689616 Pseudomonadati 3379134 Bacteria Bacteria 462 3.2399999999999995e-153   NR HRR28990.1 2212475 g242 i0 44.4 30.9284140969163 554 286 88.9 6 163 1776 1 548 HRR28990.1 hydroxylamine reductase [Victivallales bacterium] diamond 56166 462 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
28882310 28882310 PRJNA689790_S_NODE_7468_length_216_cov_2.301676_g7353_i0 PRJNA689790 7468 216 2.301676 4.97162016 Candidatus Auribacterota bacterium 2093365 Bacteria Bacteria 58.5 6.9e-8   NR MBN2145266.1 2093365 g7353 i0 40.6 0.888888888888889 64 38 88.9 0 203 12 417 480 MBN2145266.1 tetratricopeptide repeat protein [Candidatus Auribacterota bacterium] diamond 192 58.5 1 Bacteria PVC group Pseudomonadati Candidatus Auribacterota         Candidatus Auribacterota bacterium
28913731 28913731 PRJNA689790_S_NODE_8968_length_197_cov_3.156250_g8853_i0 PRJNA689790 8968 197 3.15625 6.2178125 Planctomycetota bacterium 2026780 Bacteria Bacteria 62.4 2.4e-9   NR HAK97666.1 2026780 g8853 i0 40 1.97969543147208 65 39 99 0 197 3 1563 1627 HAK97666.1 hypothetical protein [Planctomycetota bacterium] diamond 390 62.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28977259 28977259 PRJNA689790_S_NODE_15508_length_155_cov_1.313559_g15393_i0 PRJNA689790 15508 155 1.313559 2.03601645 Candidatus Gygaella obscura 3041136 Bacteria Bacteria 40 0.0281   NR MDP8260378.1 3041136 g15393 i0 41.5 0.793548387096774 41 23 77.4 1 154 35 8 48 MDP8260378.1 hypothetical protein [Candidatus Gygaella obscura] diamond 123 40 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Gygaella Candidatus Gygaella obscura
29071999 29071999 PRJNA689790_S_NODE_10408_length_184_cov_1.333333_g10293_i0 PRJNA689790 10408 184 1.333333 2.45333272 Planctomycetota bacterium 2026780 Bacteria Bacteria 54.3 1.37e-6   NR MFC1479087.1 2026780 g10293 i0 47.4 4.58152173913043 57 29 92.9 1 9 179 231 286 MFC1479087.1 LamG-like jellyroll fold domain-containing protein [Planctomycetota bacterium] diamond 843 54.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29608204 29608204 PRJNA689790_S_NODE_10890_length_180_cov_1.629371_g10775_i0 PRJNA689790 10890 180 1.629371 2.9328678 Planctomycetota bacterium 2026780 Bacteria Bacteria 60.1 1.18e-8   NR MDP6929221.1 2026780 g10775 i0 50.8 2.95 59 28 96.7 1 6 179 258 316 MDP6929221.1 histidinol dehydrogenase [Planctomycetota bacterium] diamond 531 60.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29924479 29924479 PRJNA689790_S_NODE_12371_length_170_cov_1.443609_g12256_i0 PRJNA689790 12371 170 1.443609 2.4541353 Opitutia bacterium 2026771 Bacteria Bacteria 41.2 0.0493   NR NDH15519.1 2026771 g12256 i0 41 0.688235294117647 39 23 68.8 0 27 143 91 129 NDH15519.1 tandem-95 repeat protein [Opitutia bacterium] diamond 117 41.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
29987616 29987616 PRJNA689790_S_NODE_8291_length_205_cov_1.738095_g8176_i0 PRJNA689790 8291 205 1.738095 3.56309475 Planctomycetota bacterium 2026780 Bacteria Bacteria 66.2 1.19e-10   NR MFC1758885.1 2026780 g8176 i0 50.8 2.59024390243902 61 30 89.3 0 204 22 1458 1518 MFC1758885.1 glutamate synthase large subunit [Planctomycetota bacterium] diamond 531 66.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30335517 30335517 PRJNA689790_S_NODE_4892_length_273_cov_2.487288_g4777_i0 PRJNA689790 4892 273 2.487288 6.79029624 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 65.1 7.36e-10   NR HSZ79770.1 2201154 g4777 i0 37.9 1.87912087912088 87 47 95.6 2 1 261 366 445 HSZ79770.1 serine hydrolase [Chthoniobacterales bacterium] diamond 513 65.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
30745856 30745856 PRJNA689790_S_NODE_14534_length_159_cov_1.270492_g14419_i0 PRJNA689790 14534 159 1.270492 2.02008228 Phycisphaerales bacterium 2052180 Bacteria Bacteria 68.2 1.2e-11   NR MBY0307194.1 2052180 g14419 i0 60.4 1 53 20 98.1 1 159 4 165 217 MBY0307194.1 cation transporter [Phycisphaerales bacterium] diamond 159 68.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
30935522 30935522 PRJNA689790_S_NODE_14694_length_158_cov_1.611570_g14579_i0 PRJNA689790 14694 158 1.61157 2.5462806 Phycisphaerales bacterium 2052180 Bacteria Bacteria 48.5 1.46e-5   NR MBY0307178.1 2052180 g14579 i0 48.9 0.854430379746835 45 23 85.4 0 153 19 44 88 MBY0307178.1 hypothetical protein [Phycisphaerales bacterium] diamond 135 48.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
30967153 30967153 PRJNA689790_S_NODE_15434_length_155_cov_1.652542_g15319_i0 PRJNA689790 15434 155 1.652542 2.5614401 Planctomycetota bacterium 2026780 Bacteria Bacteria 102 1.4399999999999994e-23   NR NRA37879.1 2026780 g15319 i0 82.4 0.987096774193548 51 9 98.7 0 155 3 482 532 NRA37879.1 acetate--CoA ligase [Planctomycetota bacterium] diamond 153 102 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31504607 31504607 PRJNA689790_S_NODE_14536_length_159_cov_1.262295_g14421_i0 PRJNA689790 14536 159 1.262295 2.00704905 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.1 0.00854   NR MEM9083324.1 2026780 g14421 i0 36.7 0.924528301886792 49 27 84.9 1 20 154 279 327 MEM9083324.1 glycosidase [Planctomycetota bacterium] diamond 147 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31820601 31820601 PRJNA689790_S_NODE_11417_length_176_cov_1.625899_g11302_i0 PRJNA689790 11417 176 1.625899 2.86158224 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 53.5 2.32e-6   NR MCF7674873.1 2562705 g11302 i0 53.4 4.02272727272727 58 20 97.2 2 1 171 351 402 MCF7674873.1 sulfatase [Akkermansiaceae bacterium] diamond 708 53.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
32022131 32022131 PRJNA689790_S_NODE_12298_length_170_cov_2.345865_g12183_i0 PRJNA689790 12298 170 2.345865 3.9879705 Bacteria 2 Bacteria Bacteria 60.1 1.06e-8   NR HIL70227.1 2026799 g12183 i0 42.9 1.97647058823529 56 31 98.8 1 170 3 1045 1099 HIL70227.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 336 60.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32073876 32073876 PRJNA689790_S_NODE_13278_length_165_cov_1.062500_g13163_i0 PRJNA689790 13278 165 1.0625 1.753125 Parachlamydia sp. AcF125 2795736 Bacteria Bacteria 68.6 1e-11   NR WP_213157304.1 2795736 g13163 i0 53.7 0.981818181818182 54 25 98.2 0 2 163 3165 3218 WP_213157304.1 hypothetical protein [Parachlamydia sp. AcF125] diamond 162 68.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp. AcF125
32169028 32169028 PRJNA689790_S_NODE_9638_length_191_cov_1.012987_g9523_i0 PRJNA689790 9638 191 1.012987 1.93480517 Planctomycetota bacterium 2026780 Bacteria Bacteria 54.7 1.13e-6   NR MEL6894797.1 2026780 g9523 i0 46.6 1.82198952879581 58 30 91.1 1 188 15 426 482 MEL6894797.1 arylsulfatase [Planctomycetota bacterium] diamond 348 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32200477 32200477 PRJNA689790_S_NODE_11898_length_173_cov_1.147059_g11783_i0 PRJNA689790 11898 173 1.147059 1.98441207 Phycisphaerales bacterium 2052180 Bacteria Bacteria 133 1.58e-34   NR MBY0309260.1 2052180 g11783 i0 96.5 0.988439306358382 57 2 98.8 0 3 173 10 66 MBY0309260.1 FYVE zinc finger domain-containing protein [Phycisphaerales bacterium] diamond 171 133 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
32465211 32465211 PRJNA689790_S_NODE_13919_length_162_cov_0.936000_g13804_i0 PRJNA689790 13919 162 0.936 1.51632 Bacteria 2 Bacteria Bacteria 60.8 4.88e-9   NR MEM7453634.1 2026780 g13804 i0 54.2 1.74074074074074 48 21 88.9 1 6 149 290 336 MEM7453634.1 GTP-binding protein [Planctomycetota bacterium] diamond 282 61.2 0.993464052287582 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32800298 32800298 PRJNA689790_S_NODE_13420_length_164_cov_1.527559_g13305_i0 PRJNA689790 13420 164 1.5275589999999999 2.50519676 Phycisphaerales bacterium 2052180 Bacteria Bacteria 112 2.76e-29   NR MBY0307717.1 2052180 g13305 i0 90.2 0.932926829268293 51 5 93.3 0 1 153 178 228 MBY0307717.1 S10 family peptidase [Phycisphaerales bacterium] diamond 153 112 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;