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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA688931" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688931 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8321608 8321608 PRJNA688931_P_NODE_23967_length_209_cov_1.281250_g23754_i0 PRJNA688931 23967 209 1.28125 2.6778125 Pseudomonadati 3379134 Bacteria Bacteria 100 5.85e-23   NR MBP7949858.1 2026801 g23754 i0 77.3 3.88995215311005 66 15 94.7 0 209 12 308 373 MBP7949858.1 ADP-forming succinate--CoA ligase subunit beta [Verrucomicrobiales bacterium] diamond 813 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
26607304 26607304 PRJNA688931_P_NODE_301_length_1602_cov_3.237605_g264_i0 PRJNA688931 301 1602 3.237605 51.8664321 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 82.8 1.34e-12   NR HYG84357.1 2499141 g264 i0 22.8 0.779026217228464 416 257 76.4 7 1601 378 134 493 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 1248 82.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
26924165 26924165 PRJNA688931_P_NODE_37442_length_167_cov_0.872881_g37229_i0 PRJNA688931 37442 167 0.872881 1.45771127 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 57.4 6.21e-8   NR MBI4661017.1 2026799 g37229 i0 51 0.916167664670659 51 25 91.6 0 162 10 69 119 MBI4661017.1 WD40 repeat domain-containing protein [Verrucomicrobiota bacterium] diamond 153 57.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27082320 27082320 PRJNA688931_P_NODE_31342_length_181_cov_1.098485_g31129_i0 PRJNA688931 31342 181 1.098485 1.98825785 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 60.1 1.19e-8   NR HYG84357.1 2499141 g31129 i0 49 0.812154696132597 49 25 81.2 0 15 161 104 152 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 147 60.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27555997 27555997 PRJNA688931_P_NODE_2024_length_796_cov_1.808568_g1867_i0 PRJNA688931 2024 796 1.808568 14.39620128 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 163 2.73e-45   NR MDH7502297.1 2026799 g1867 i0 36.7 0.810301507537688 215 136 81 0 768 124 26 240 MDH7502297.1 slipin family protein [Verrucomicrobiota bacterium] diamond 645 163 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27777393 27777393 PRJNA688931_P_NODE_14344_length_273_cov_1.446429_g14131_i0 PRJNA688931 14344 273 1.446429 3.94875117 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 45.8 0.00444   NR HEY4416735.1 2499141 g14131 i0 25.8 1.86813186813187 89 55 85.7 1 268 35 388 476 HEY4416735.1 protein kinase [Verrucomicrobiia bacterium] diamond 510 45.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27777422 27777422 PRJNA688931_P_NODE_33144_length_175_cov_1.230159_g32931_i0 PRJNA688931 33144 175 1.230159 2.15277825 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 53.9 1.73e-6   NR PYK99157.1 2026799 g32931 i0 51.9 6.32571428571429 54 24 89.1 2 174 19 230 283 PYK99157.1 MAG: hypothetical protein DME19_09690, partial [Verrucomicrobiota bacterium] diamond 1107 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27809067 27809067 PRJNA688931_P_NODE_704_length_1253_cov_3.393688_g630_i0 PRJNA688931 704 1253 3.393688 42.52291064 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 237 2.4699999999999998e-68   NR HYG84357.1 2499141 g630 i0 42.2 0.895450917797286 374 191 84.3 7 1066 11 19 389 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 1122 237 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27840229 27840229 PRJNA688931_P_NODE_9564_length_343_cov_2.244898_g9351_i0 PRJNA688931 9564 343 2.244898 7.70000014 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 54.3 9.9e-6   NR HYG84357.1 2499141 g9351 i0 37.5 1.39941690962099 80 48 68.2 1 3 236 445 524 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 480 54.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27998454 27998454 PRJNA688931_P_NODE_28885_length_189_cov_1.471429_g28672_i0 PRJNA688931 28885 189 1.471429 2.78100081 Roseibacillus sp. 2024856 Bacteria Bacteria 40.4 0.0209   NR MFP6880074.1 2024856 g28672 i0 45.7 0.73015873015873 46 18 61.9 1 181 65 22 67 MFP6880074.1 hypothetical protein [Roseibacillus sp.] diamond 138 40.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Roseibacillus Roseibacillus sp.
28566563 28566563 PRJNA688931_P_NODE_39887_length_165_cov_0.887931_g39674_i0 PRJNA688931 39887 165 0.887931 1.46508615 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 39.3 0.0241   NR MEY2787959.1 2026799 g39674 i0 77.3 0.4 22 5 40 0 100 165 4 25 MEY2787959.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 66 39.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29639833 29639833 PRJNA688931_P_NODE_41250_length_164_cov_0.886957_g41037_i0 PRJNA688931 41250 164 0.886957 1.45460948 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 60.8 5.13e-9   NR MDF1738566.1 2026801 g41037 i0 90 0.548780487804878 30 3 54.9 0 1 90 109 138 MDF1738566.1 sulfatase-like hydrolase/transferase [Verrucomicrobiales bacterium] diamond 90 60.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
29671346 29671346 PRJNA688931_P_NODE_36070_length_168_cov_0.873950_g35857_i0 PRJNA688931 36070 168 0.87395 1.468236 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 87 4.37e-19   NR MEO6871375.1 2201154 g35857 i0 70.9 6.875 55 16 98.2 0 3 167 37 91 MEO6871375.1 UvrB/UvrC motif-containing protein [Chthoniobacterales bacterium] diamond 1155 87 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
29702887 29702887 PRJNA688931_P_NODE_40470_length_164_cov_1.339130_g40257_i0 PRJNA688931 40470 164 1.33913 2.1961732 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 43.9 0.00502   NR HYG84357.1 2499141 g40257 i0 42.6 0.98780487804878 54 29 98.8 1 2 163 132 183 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 162 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29892970 29892970 PRJNA688931_P_NODE_38351_length_166_cov_0.888889_g38138_i0 PRJNA688931 38351 166 0.888889 1.47555574 Luteolibacter ambystomatis 2824561 Bacteria Bacteria 60.1 4.12e-9   NR WP_211629621.1 2824561 g38138 i0 47.4 3.19879518072289 57 23 90.4 1 14 163 122 178 WP_211629621.1 metallophosphoesterase family protein [Luteolibacter ambystomatis] diamond 531 60.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter ambystomatis
30177005 30177005 PRJNA688931_P_NODE_38732_length_166_cov_0.880342_g38519_i0 PRJNA688931 38732 166 0.880342 1.46136772 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 54.3 1.1e-6   NR MBP7948256.1 2026801 g38519 i0 50.9 0.957831325301205 53 26 95.8 0 165 7 162 214 MBP7948256.1 carboxypeptidase regulatory-like domain-containing protein [Verrucomicrobiales bacterium] diamond 159 54.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
31251313 31251313 PRJNA688931_P_NODE_32375_length_177_cov_1.617188_g32162_i0 PRJNA688931 32375 177 1.617188 2.86242276 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 75.9 3.07e-14   NR HEV7868859.1 2811408 g32162 i0 66 2.66101694915254 53 18 89.8 0 177 19 286 338 HEV7868859.1 N-acetylmuramoyl-L-alanine amidase [Chthoniobacteraceae bacterium] diamond 471 75.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
31536267 31536267 PRJNA688931_P_NODE_38636_length_166_cov_0.880342_g38423_i0 PRJNA688931 38636 166 0.880342 1.46136772 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 68.9 7.59e-12   NR MDQ6654375.1 2026799 g38423 i0 57.4 0.975903614457831 54 23 97.6 0 166 5 83 136 MDQ6654375.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 162 68.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31599471 31599471 PRJNA688931_P_NODE_36276_length_168_cov_0.865546_g36063_i0 PRJNA688931 36276 168 0.865546 1.45411728 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 56.6 1.68e-7   NR HYG84357.1 2499141 g36063 i0 64.9 0.660714285714286 37 13 66.1 0 56 166 219 255 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 111 56.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31630879 31630879 PRJNA688931_P_NODE_42736_length_163_cov_0.877193_g42523_i0 PRJNA688931 42736 163 0.877193 1.42982459 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 59.7 1.26e-8   NR MEI8341392.1 2026799 g42523 i0 54.7 0.975460122699387 53 24 97.5 0 161 3 360 412 MEI8341392.1 cellulase family glycosylhydrolase [Verrucomicrobiota bacterium] diamond 159 59.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31725712 31725712 PRJNA688931_P_NODE_16397_length_254_cov_1.175610_g16184_i0 PRJNA688931 16397 254 1.17561 2.9860494 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 71.2 3.81e-12   NR MFO1486663.1 2026800 g16184 i0 53 1.55905511811024 66 28 78 1 249 52 437 499 MFO1486663.1 SIS domain-containing protein [Verrucomicrobiaceae bacterium] diamond 396 71.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31915569 31915569 PRJNA688931_P_NODE_17237_length_247_cov_1.797980_g17024_i0 PRJNA688931 17237 247 1.79798 4.4410106 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.00801   NR MEI6588542.1 2026799 g17024 i0 29.2 0.874493927125506 72 49 87.4 1 233 18 558 627 MEI6588542.1 SulP family inorganic anion transporter [Verrucomicrobiota bacterium] diamond 216 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32863364 32863364 PRJNA688931_P_NODE_23300_length_212_cov_1.263804_g23087_i0 PRJNA688931 23300 212 1.263804 2.67926448 Puniceicoccales bacterium 2478473 Bacteria Bacteria 46.2 0.00149   NR MDR2377529.1 2478473 g23087 i0 46.7 1.2877358490566 45 24 63.7 0 76 210 202 246 MDR2377529.1 LPS-assembly protein LptD [Puniceicoccales bacterium] diamond 273 46.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales     Puniceicoccales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;