RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA688736" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA688736 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8830817 8830817 PRJNA688736_P_NODE_49467_length_243_cov_0.917647_g49182_i0 PRJNA688736 49467 243 0.917647 2.22988221 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 126 1.0599999999999998e-31   NR XP_004029989.1 5932 g49182 i0 71.3 1.97530864197531 80 23 98.8 0 2 241 375 454 XP_004029989.1 hypothetical protein IMG5_169500 [Ichthyophthirius multifiliis] diamond 480 127 0.992125984251969 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
9596722 9596722 PRJNA688736_P_NODE_47928_length_245_cov_0.906977_g47643_i0 PRJNA688736 47928 245 0.906977 2.22209365 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 115 9.79e-28   NR QBH22568.1 282688 g47643 i0 72.8 0.991836734693878 81 22 99.2 0 245 3 767 847 QBH22568.1 V-type proton ATPase subunit a [Philasterides dicentrarchi] diamond 243 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
29335926 29335926 PRJNA688736_P_NODE_43809_length_249_cov_0.886364_g43524_i0 PRJNA688736 43809 249 0.886364 2.20704636 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 62.4 4.74e-9   NR XP_001444384.1 5888 g43524 i0 40.5 4.74698795180723 79 42 95.2 1 248 12 101 174 XP_001444384.1 uncharacterized protein GSPATT00012511001 [Paramecium tetraurelia] diamond 1182 62.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
29967518 29967518 PRJNA688736_P_NODE_47031_length_246_cov_0.901734_g46746_i0 PRJNA688736 47031 246 0.901734 2.21826564 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 118 1.9499999999999999e-31   NR XP_012653439.1 312017 g46746 i0 69.1 2.96341463414634 81 25 98.8 0 245 3 23 103 XP_012653439.1 60S ribosomal protein L17 [Tetrahymena thermophila SB210] diamond 729 119 0.991596638655462 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30967082 30967082 PRJNA688736_P_NODE_45854_length_247_cov_0.896552_g45569_i0 PRJNA688736 45854 247 0.896552 2.21448344 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 105 2.51e-24   NR OMJ78935.1 5963 g45569 i0 59.3 0.983805668016194 81 32 98.4 1 245 3 333 412 OMJ78935.1 hypothetical protein SteCoe_21156 [Stentor coeruleus] diamond 243 105 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
31883856 31883856 PRJNA688736_P_NODE_45757_length_247_cov_0.896552_g45472_i0 PRJNA688736 45757 247 0.896552 2.21448344 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 82.4 4.26e-16   NR XP_001426365.1 5888 g45472 i0 44.9 0.947368421052632 78 43 94.7 0 2 235 151 228 XP_001426365.1 uncharacterized protein GSPATT00029597001 [Paramecium tetraurelia] diamond 234 82.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
32200400 32200400 PRJNA688736_P_NODE_9958_length_473_cov_3.570000_g9674_i0 PRJNA688736 9958 473 3.57 16.8861 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 54.3 3.27e-5   NR CAG9310987.1 1481888 g9674 i0 35.1 0.596194503171247 94 56 59 2 401 123 231 320 CAG9310987.1 unnamed protein product [Blepharisma stoltei] diamond 282 54.3 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
32232260 32232260 PRJNA688736_P_NODE_48618_length_244_cov_0.912281_g48333_i0 PRJNA688736 48618 244 0.912281 2.22596564 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 52.4 1.44e-5   NR KRX06315.1 266149 g48333 i0 37.9 1.45081967213115 58 36 71.3 0 241 68 265 322 KRX06315.1 Protein kinase-like domain [Pseudocohnilembus persalinus] diamond 354 52.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;