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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA688736" and tax_clade = "FCB group"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 15 ✖

bioproject 1

  • PRJNA688736 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5771836 5771836 PRJNA688736_P_NODE_50465_length_242_cov_0.923077_g50180_i0 PRJNA688736 50465 242 0.923077 2.23384634 Candidatus Nephrothrix sp. EaCA 2044729 Bacteria Bacteria 147 1.07e-42   NR PGH37897.1 2044729 g50180 i0 98.6 0.867768595041322 70 1 86.8 0 240 31 136 205 PGH37897.1 MAG: hypothetical protein CRN43_18450, partial [Candidatus Nephrothrix sp. EaCA] diamond 210 147 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Candidatus Nephrothrix Candidatus Nephrothrix sp. EaCA
27145059 27145059 PRJNA688736_P_NODE_40382_length_253_cov_0.866667_g40097_i0 PRJNA688736 40382 253 0.866667 2.19266751 Bacteroidota bacterium 1898104 Bacteria Bacteria 84.3 9.81e-17   NR MBS1651351.1 1898104 g40097 i0 48.8 0.99604743083004 84 43 99.6 0 253 2 609 692 MBS1651351.1 T9SS type A sorting domain-containing protein [Bacteroidota bacterium] diamond 252 84.3 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27493111 27493111 PRJNA688736_P_NODE_37663_length_260_cov_2.299465_g37378_i0 PRJNA688736 37663 260 2.299465 5.978609 Candidatus Nephrothrix sp. EaCA 2044729 Bacteria Bacteria 51.2 6.12e-6   NR PGH37164.1 2044729 g37378 i0 95.8 0.276923076923077 24 1 27.7 0 189 260 56 79 PGH37164.1 MAG: hypothetical protein CRN43_22790 [Candidatus Nephrothrix sp. EaCA] diamond 72 51.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Candidatus Nephrothrix Candidatus Nephrothrix sp. EaCA
27682836 27682836 PRJNA688736_P_NODE_3704_length_738_cov_1.201504_g3450_i0 PRJNA688736 3704 738 1.201504 8.86709952 Candidatus Nephrothrix sp. EaCA 2044729 Bacteria Bacteria 240 6.58e-75   NR PGH37471.1 2044729 g3450 i0 75.3 0.609756097560976 150 37 61 0 736 287 182 331 PGH37471.1 MAG: hypothetical protein CRN43_21000, partial [Candidatus Nephrothrix sp. EaCA] diamond 450 240 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Candidatus Nephrothrix Candidatus Nephrothrix sp. EaCA
27840163 27840163 PRJNA688736_P_NODE_40444_length_253_cov_0.866667_g40159_i0 PRJNA688736 40444 253 0.866667 2.19266751 Sphingobacterium alimentarium 797292 Bacteria Bacteria 161 8.88e-45   NR WP_132779283.1 797292 g40159 i0 100 0.984189723320158 83 0 98.4 0 251 3 155 237 WP_132779283.1 RagB/SusD family nutrient uptake outer membrane protein [Sphingobacterium alimentarium] diamond 249 161 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium alimentarium
28219020 28219020 PRJNA688736_P_NODE_42346_length_251_cov_0.876404_g42061_i0 PRJNA688736 42346 251 0.876404 2.19977404 Candidatus Nephrothrix sp. EaCA 2044729 Bacteria Bacteria 111 3.25e-26   NR PGH38545.1 2044729 g42061 i0 67.1 1.97211155378486 82 27 98 0 249 4 715 796 PGH38545.1 MAG: hypothetical protein CRN43_14440 [Candidatus Nephrothrix sp. EaCA] diamond 495 111 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Candidatus Nephrothrix Candidatus Nephrothrix sp. EaCA
29071933 29071933 PRJNA688736_P_NODE_43148_length_250_cov_0.881356_g42863_i0 PRJNA688736 43148 250 0.881356 2.20339 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 144 4.43e-39   NR HEX3273601.1 2448054 g42863 i0 80.7 0.996 83 16 99.6 0 1 249 135 217 HEX3273601.1 transposase [Gemmatimonadales bacterium] diamond 249 144 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
29639797 29639797 PRJNA688736_P_NODE_19490_length_352_cov_3.272401_g19205_i0 PRJNA688736 19490 352 3.272401 11.51885152 Candidatus Nephrothrix sp. EaCA 2044729 Bacteria Bacteria 62.8 9.94e-9   NR PGH37471.1 2044729 g19205 i0 46.7 0.639204545454545 75 37 63.9 1 330 106 2 73 PGH37471.1 MAG: hypothetical protein CRN43_21000, partial [Candidatus Nephrothrix sp. EaCA] diamond 225 62.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Candidatus Nephrothrix Candidatus Nephrothrix sp. EaCA
29935981 29935981 PRJNA688736_P_NODE_40071_length_253_cov_0.866667_g39786_i0 PRJNA688736 40071 253 0.866667 2.19266751 Pseudomonadati 3379134 Bacteria Bacteria 58.2 3.77e-8   NR PGH37340.1 2044729 g39786 i0 76.5 0.889328063241107 34 8 40.3 0 252 151 123 156 PGH37340.1 MAG: hypothetical protein CRN43_21760 [Candidatus Nephrothrix sp. EaCA] diamond 225 58.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Candidatus Nephrothrix Candidatus Nephrothrix sp. EaCA
30082105 30082105 PRJNA688736_P_NODE_40872_length_252_cov_0.871508_g40587_i0 PRJNA688736 40872 252 0.871508 2.19620016 Fibrisoma montanum 2305895 Bacteria Bacteria 108 2.12e-25   NR WP_119669855.1 2305895 g40587 i0 65.1 0.988095238095238 83 29 98.8 0 250 2 77 159 WP_119669855.1 SusC/RagA family TonB-linked outer membrane protein [Fibrisoma montanum] diamond 249 108 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Fibrisoma Fibrisoma montanum
30208366 30208366 PRJNA688736_P_NODE_24412_length_321_cov_0.943548_g24127_i0 PRJNA688736 24412 321 0.943548 3.02878908 Candidatus Nephrothrix sp. EaCA 2044729 Bacteria Bacteria 105 1.72e-27   NR PGH37166.1 2044729 g24127 i0 92.7 0.514018691588785 55 4 51.4 0 45 209 1 55 PGH37166.1 MAG: hypothetical protein CRN43_22775 [Candidatus Nephrothrix sp. EaCA] diamond 165 105 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Candidatus Nephrothrix Candidatus Nephrothrix sp. EaCA
30536121 30536121 PRJNA688736_P_NODE_39673_length_253_cov_1.411111_g39388_i0 PRJNA688736 39673 253 1.411111 3.57011083 Chryseobacterium 59732 Bacteria Bacteria 140 5.63e-38   NR WP_147756530.1 1871047 g39388 i0 85.7 8.89328063241107 84 12 99.6 0 253 2 85 168 WP_147756530.1 FtsW/RodA/SpoVE family cell cycle protein [Chryseobacterium sp.] diamond 2250 140 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp.
30978661 30978661 PRJNA688736_P_NODE_46574_length_246_cov_0.901734_g46289_i0 PRJNA688736 46574 246 0.901734 2.21826564 Seramator 2919400 Bacteria Bacteria 161 3.2499999999999996e-48   NR MDK2838396.1 1898104 g46289 i0 98.8 3.95121951219512 81 1 98.8 0 2 244 112 192 MDK2838396.1 outer membrane protein [Bacteroidota bacterium] diamond 972 162 0.993827160493827 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
31199205 31199205 PRJNA688736_P_NODE_39835_length_253_cov_0.866667_g39550_i0 PRJNA688736 39835 253 0.866667 2.19266751 Bacteria 2 Bacteria Bacteria 148 2.76e-39   NR MCW5914747.1 1869212 g39550 i0 89.3 3.98418972332016 84 4 99.6 1 252 1 378 456 MCW5914747.1 type I restriction endonuclease subunit R [Chitinophagaceae bacterium] diamond 1008 149 0.993288590604027 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
32022109 32022109 PRJNA688736_P_NODE_41898_length_251_cov_0.876404_g41613_i0 PRJNA688736 41898 251 0.876404 2.19977404 root 1 Root_unresolved Root_unresolved 60.8 1.72e-8   NR MFM2291787.1 1898104 g41613 i0 44.9 1.64940239043825 69 35 78.9 2 41 238 759 827 MFM2291787.1 hypothetical protein [Bacteroidota bacterium] diamond 414 60.8 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;