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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA688655" and tax_phylum = "Elusimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA688655 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23619947 23619947 PRJNA688655_P_NODE_13199_length_245_cov_0.895349_g13134_i0 PRJNA688655 13199 245 0.895349 2.19360505 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 155 2.7899999999999998e-42   NR NLE92078.1 2030800 g13134 i0 100 0.991836734693878 81 0 99.2 0 244 2 89 169 NLE92078.1 elongation factor 4 [Elusimicrobiota bacterium] diamond 243 155 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
27018984 27018984 PRJNA688655_P_NODE_16382_length_241_cov_0.916667_g16317_i0 PRJNA688655 16382 241 0.916667 2.20916747 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 152 3.36e-44   NR MDD5022075.1 2775028 g16317 i0 93.8 0.995850622406639 80 5 99.6 0 240 1 97 176 MDD5022075.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase [Endomicrobiaceae bacterium] diamond 240 152 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
27271882 27271882 PRJNA688655_P_NODE_11123_length_247_cov_0.885057_g11058_i0 PRJNA688655 11123 247 0.885057 2.18609079 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 79.7 1.15e-16   NR MEA5000299.1 2775028 g11058 i0 62.7 1.4331983805668 59 22 71.7 0 70 246 1 59 MEA5000299.1 superoxide dismutase [Ni] [Endomicrobiaceae bacterium] diamond 354 79.7 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
27271899 27271899 PRJNA688655_P_NODE_4943_length_296_cov_1.381166_g4878_i0 PRJNA688655 4943 296 1.381166 4.08825136 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 185 6.619999999999998e-54   NR MEA5000297.1 2775028 g4878 i0 92.9 0.993243243243243 98 7 99.3 0 295 2 261 358 MEA5000297.1 phytoene desaturase family protein [Endomicrobiaceae bacterium] diamond 294 185 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
27461640 27461640 PRJNA688655_P_NODE_5103_length_293_cov_1.400000_g5038_i0 PRJNA688655 5103 293 1.4 4.102 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 73.9 7.36e-13   NR MDD3730728.1 2775028 g5038 i0 67 1.98634812286689 97 32 99.3 0 293 3 8 104 MDD3730728.1 hypothetical protein [Endomicrobiaceae bacterium] diamond 582 73.9 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
28661362 28661362 PRJNA688655_P_NODE_11987_length_246_cov_0.890173_g11922_i0 PRJNA688655 11987 246 0.890173 2.18982558 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 118 8.640000000000001e-29   NR MEA5000596.1 2775028 g11922 i0 100 0.75609756097561 62 0 75.6 0 186 1 1 62 MEA5000596.1 OmpA family protein [Endomicrobiaceae bacterium] diamond 186 118 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
28787394 28787394 PRJNA688655_P_NODE_14807_length_243_cov_0.905882_g14742_i0 PRJNA688655 14807 243 0.905882 2.20129326 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 108 3.68e-25   NR MBO7431801.1 2030800 g14742 i0 64.2 1 81 29 100 0 1 243 2208 2288 MBO7431801.1 hypothetical protein [Elusimicrobiota bacterium] diamond 243 108 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28945690 28945690 PRJNA688655_P_NODE_10948_length_247_cov_0.885057_g10883_i0 PRJNA688655 10948 247 0.885057 2.18609079 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 170 1.05e-48   NR MEA5000534.1 2775028 g10883 i0 100 0.995951417004049 82 0 99.6 0 1 246 41 122 MEA5000534.1 monomeric [FeFe] hydrogenase [Endomicrobiaceae bacterium] diamond 246 170 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
29071920 29071920 PRJNA688655_P_NODE_15448_length_242_cov_0.911243_g15383_i0 PRJNA688655 15448 242 0.911243 2.20520806 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 155 1.37e-44   NR NLE91347.1 2030800 g15383 i0 100 0.991735537190083 80 0 99.2 0 242 3 133 212 NLE91347.1 4-hydroxy-tetrahydrodipicolinate synthase [Elusimicrobiota bacterium] diamond 240 155 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30113750 30113750 PRJNA688655_P_NODE_10872_length_247_cov_0.885057_g10807_i0 PRJNA688655 10872 247 0.885057 2.18609079 Elusimicrobiaceae bacterium 2735568 Bacteria Bacteria 115 1.8e-30   NR MBR2081805.1 2735568 g10807 i0 81 3.87449392712551 79 15 96 0 242 6 40 118 MBR2081805.1 hypothetical protein [Elusimicrobiaceae bacterium] diamond 957 115 1 Bacteria   Pseudomonadati Elusimicrobiota Elusimicrobia Elusimicrobiales Elusimicrobiaceae   Elusimicrobiaceae bacterium
30176933 30176933 PRJNA688655_P_NODE_13032_length_245_cov_0.895349_g12967_i0 PRJNA688655 13032 245 0.895349 2.19360505 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 167 6.03e-46   NR MDD3730019.1 2775028 g12967 i0 98.8 1.98367346938776 81 1 99.2 0 243 1 1522 1602 MDD3730019.1 hypothetical protein [Endomicrobiaceae bacterium] diamond 486 167 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
30220134 30220134 PRJNA688655_P_NODE_15672_length_242_cov_0.911243_g15607_i0 PRJNA688655 15672 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 140 1.02e-38   NR MFA6614369.1 2660713 g15607 i0 93.8 1.98347107438017 80 5 99.2 0 242 3 219 298 MFA6614369.1 efflux RND transporter permease subunit [Endomicrobiia bacterium] diamond 480 140 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia       Endomicrobiia bacterium
30461851 30461851 PRJNA688655_P_NODE_8173_length_251_cov_0.865169_g8108_i0 PRJNA688655 8173 251 0.865169 2.17157419 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 144 5.68e-38   NR MDD3065311.1 2775028 g8108 i0 91.6 1.9840637450199201 83 7 99.2 0 2 250 451 533 MDD3065311.1 hypothetical protein [Endomicrobiaceae bacterium] diamond 498 144 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
30473082 30473082 PRJNA688655_P_NODE_16433_length_241_cov_0.916667_g16368_i0 PRJNA688655 16433 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 73.2 5.88e-13   NR MFA6613520.1 2660713 g16368 i0 50 3.63485477178423 68 34 84.6 0 18 221 255 322 MFA6613520.1 O-antigen ligase family protein [Endomicrobiia bacterium] diamond 876 73.2 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia       Endomicrobiia bacterium
30587630 30587630 PRJNA688655_P_NODE_15013_length_243_cov_0.905882_g14948_i0 PRJNA688655 15013 243 0.905882 2.20129326 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 126 5.05e-33   NR MDD3730313.1 2775028 g14948 i0 100 1.48148148148148 60 0 74.1 0 180 1 1 60 MDD3730313.1 U32 family peptidase [Endomicrobiaceae bacterium] diamond 360 126 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
30587635 30587635 PRJNA688655_P_NODE_16513_length_241_cov_0.916667_g16448_i0 PRJNA688655 16513 241 0.916667 2.20916747 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 143 1.74e-37   NR MDD3065606.1 2775028 g16448 i0 97.5 2.95020746887967 79 2 98.3 0 239 3 897 975 MDD3065606.1 hypothetical protein [Endomicrobiaceae bacterium] diamond 711 143 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
30998588 30998588 PRJNA688655_P_NODE_3314_length_336_cov_0.798479_g3249_i0 PRJNA688655 3314 336 0.798479 2.68288944 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 186 1.14e-53   NR MDD3064906.1 2775028 g3249 i0 93.3 0.9375 105 7 93.8 0 22 336 1 105 MDD3064906.1 radical SAM protein [Endomicrobiaceae bacterium] diamond 315 186 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
31030387 31030387 PRJNA688655_P_NODE_8695_length_250_cov_0.870056_g8630_i0 PRJNA688655 8695 250 0.870056 2.17514 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 153 1.74e-41   NR MDD4166853.1 2775028 g8630 i0 100 2.988 83 0 99.6 0 249 1 551 633 MDD4166853.1 hypothetical protein [Endomicrobiaceae bacterium] diamond 747 153 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium
31377969 31377969 PRJNA688655_P_NODE_6136_length_274_cov_1.532338_g6071_i0 PRJNA688655 6136 274 1.532338 4.19860612 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 53.9 5.01e-6   NR MEW6557198.1 2030800 g6071 i0 39 0.897810218978102 82 45 85.4 2 235 2 180 260 MEW6557198.1 ATP-binding protein [Elusimicrobiota bacterium] diamond 246 53.9 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31536199 31536199 PRJNA688655_P_NODE_12036_length_246_cov_0.890173_g11971_i0 PRJNA688655 12036 246 0.890173 2.18982558 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 164 1.55e-47   NR NLE91701.1 2030800 g11971 i0 100 0.98780487804878 81 0 98.8 0 245 3 194 274 NLE91701.1 FAD-dependent oxidoreductase [Elusimicrobiota bacterium] diamond 243 164 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31852164 31852164 PRJNA688655_P_NODE_11917_length_246_cov_0.890173_g11852_i0 PRJNA688655 11917 246 0.890173 2.18982558 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 157 3.88e-45   NR NLE91700.1 2030800 g11852 i0 98.8 0.98780487804878 81 1 98.8 0 2 244 212 292 NLE91700.1 UDP-glucose 4-epimerase GalE [Elusimicrobiota bacterium] diamond 243 157 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31978790 31978790 PRJNA688655_P_NODE_15138_length_242_cov_0.911243_g15073_i0 PRJNA688655 15138 242 0.911243 2.20520806 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 135 4.74e-38   NR NLE91785.1 2030800 g15073 i0 100 1.68595041322314 68 0 84.3 0 240 37 134 201 NLE91785.1 penicillin-binding protein activator LpoB [Elusimicrobiota bacterium] diamond 408 135 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
32042166 32042166 PRJNA688655_P_NODE_14558_length_243_cov_0.905882_g14493_i0 PRJNA688655 14558 243 0.905882 2.20129326 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 99.4 4.42e-22   NR MCG3203663.1 2030800 g14493 i0 72.1 0.839506172839506 68 19 84 0 232 29 192 259 MCG3203663.1 Elongation factor 4 [Elusimicrobiota bacterium] diamond 204 99.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
32674231 32674231 PRJNA688655_P_NODE_7920_length_251_cov_0.865169_g7855_i0 PRJNA688655 7920 251 0.865169 2.17157419 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 108 2.29e-25   NR MDD3064943.1 2775028 g7855 i0 98.2 0.669322709163347 56 1 66.9 0 168 1 1 56 MDD3064943.1 S1 RNA-binding domain-containing protein [Endomicrobiaceae bacterium] diamond 168 108 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;