RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA688655" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA688655 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4495063 4495063 PRJNA688655_P_NODE_12004_length_246_cov_0.890173_g11939_i0 PRJNA688655 12004 246 0.890173 2.18982558 Discostella pseudostelligera 259834 SAR_Eukaryotes SAR_Eukaryotes 144 7.2699999999999995e-38   NR KAL3756579.1 259834 g11939 i0 98.8 0.98780487804878 81 1 98.8 0 245 3 121 201 KAL3756579.1 hypothetical protein ACHAWU_001782 [Discostella pseudostelligera] diamond 243 144 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Discostella Discostella pseudostelligera
27651050 27651050 PRJNA688655_P_NODE_4764_length_300_cov_1.061674_g4699_i0 PRJNA688655 4764 300 1.061674 3.185022 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0401   NR XP_013253311.1 5801 g4699 i0 35.9 0.64 64 38 61 1 2 184 355 418 XP_013253311.1 hypothetical protein, conserved [Eimeria acervulina] diamond 192 43.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;