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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA688414" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA688414 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1943032 1943032 PRJNA688414_P_NODE_7702_length_245_cov_0.906977_g7668_i0 PRJNA688414 7702 245 0.906977 2.22209365 Chloroflexota bacterium 2026724 Bacteria Bacteria 99.4 2.29e-22   NR MFN8634257.1 2026724 g7668 i0 60.5 0.991836734693878 81 32 99.2 0 1 243 32 112 MFN8634257.1 hypothetical protein [Chloroflexota bacterium] diamond 243 99.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
24128804 24128804 PRJNA688414_P_NODE_7119_length_248_cov_0.891429_g7085_i0 PRJNA688414 7119 248 0.891429 2.21074392 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 130 3.45e-36   NR HEU5203716.1 2952938 g7085 i0 76.8 0.991935483870968 82 19 99.2 0 247 2 24 105 HEU5203716.1 nitroreductase family protein [Candidatus Limnocylindrales bacterium] diamond 246 130 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
27188474 27188474 PRJNA688414_P_NODE_6562_length_250_cov_0.881356_g6528_i0 PRJNA688414 6562 250 0.881356 2.20339 Bacteria 2 Bacteria Bacteria 153 5.919999999999998e-43   NR MEZ0240558.1 2026724 g6528 i0 80.7 1.992 83 16 99.6 0 249 1 211 293 MEZ0240558.1 DUF3048 domain-containing protein [Chloroflexota bacterium] diamond 498 154 0.993506493506494 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27555954 27555954 PRJNA688414_P_NODE_6244_length_252_cov_0.871508_g6210_i0 PRJNA688414 6244 252 0.871508 2.19620016 Chloroflexota bacterium 2026724 Bacteria Bacteria 145 6.87e-40   NR MFL5685637.1 2026724 g6210 i0 91.6 1.96428571428571 83 7 98.8 0 3 251 305 387 MFL5685637.1 pyridoxal-phosphate-dependent aminotransferase family protein [Chloroflexota bacterium] diamond 495 145 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28755978 28755978 PRJNA688414_P_NODE_6167_length_252_cov_0.871508_g6133_i0 PRJNA688414 6167 252 0.871508 2.19620016 Anaerolineae bacterium 2052143 Bacteria Bacteria 159 1.63e-45   NR MFN2167055.1 2052143 g6133 i0 91.7 1 84 7 100 0 1 252 37 120 MFN2167055.1 PQQ-binding-like beta-propeller repeat protein [Anaerolineae bacterium] diamond 252 159 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29513584 29513584 PRJNA688414_P_NODE_6850_length_249_cov_0.886364_g6816_i0 PRJNA688414 6850 249 0.886364 2.20704636 Chloroflexota bacterium 2026724 Bacteria Bacteria 125 1.17e-32   NR MDQ2997639.1 2026724 g6816 i0 83.6 0.879518072289157 73 12 88 0 30 248 96 168 MDQ2997639.1 YidC/Oxa1 family membrane protein insertase [Chloroflexota bacterium] diamond 219 125 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30082084 30082084 PRJNA688414_P_NODE_6452_length_251_cov_0.876404_g6418_i0 PRJNA688414 6452 251 0.876404 2.19977404 Caldilineaceae bacterium 2614250 Bacteria Bacteria 62.8 1.93e-9   NR MCB0097555.1 2614250 g6418 i0 73 0.442231075697211 37 10 44.2 0 250 140 215 251 MCB0097555.1 sugar phosphate isomerase/epimerase [Caldilineaceae bacterium] diamond 111 62.8 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
30145126 30145126 PRJNA688414_P_NODE_6772_length_249_cov_0.886364_g6738_i0 PRJNA688414 6772 249 0.886364 2.20704636 Chloroflexota bacterium 2026724 Bacteria Bacteria 144 5.96e-41   NR MBX5489816.1 2026724 g6738 i0 89.2 1 83 9 100 0 249 1 18 100 MBX5489816.1 ABC transporter permease [Chloroflexota bacterium] diamond 249 144 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30903810 30903810 PRJNA688414_P_NODE_6774_length_249_cov_0.886364_g6740_i0 PRJNA688414 6774 249 0.886364 2.20704636 Chloroflexota bacterium 2026724 Bacteria Bacteria 84.3 9.37e-17   NR MBI4785674.1 2026724 g6740 i0 50.6 1 83 41 100 0 249 1 651 733 MBI4785674.1 hypothetical protein [Chloroflexota bacterium] diamond 249 84.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30935425 30935425 PRJNA688414_P_NODE_7034_length_248_cov_0.891429_g7000_i0 PRJNA688414 7034 248 0.891429 2.21074392 Tepidiformaceae bacterium 3022862 Bacteria Bacteria 92 1.35e-19   NR HXU25111.1 3022862 g7000 i0 75.9 0.653225806451613 54 13 65.3 0 1 162 40 93 HXU25111.1 hypothetical protein [Tepidiformaceae bacterium] diamond 162 92 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae   Tepidiformaceae bacterium
31346318 31346318 PRJNA688414_P_NODE_7816_length_244_cov_0.912281_g7782_i0 PRJNA688414 7816 244 0.912281 2.22596564 Chloroflexia bacterium 2448782 Bacteria Bacteria 120 1.8599999999999995e-31   NR MFN8515486.1 2448782 g7782 i0 80 1.04508196721311 85 10 99.6 2 1 243 76 157 MFN8515486.1 chromate resistance protein [Chloroflexia bacterium] diamond 255 120 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
31630816 31630816 PRJNA688414_P_NODE_6236_length_252_cov_0.871508_g6202_i0 PRJNA688414 6236 252 0.871508 2.19620016 Anaerolineae bacterium 2052143 Bacteria Bacteria 91.3 3.33e-19   NR MCL4302270.1 2052143 g6202 i0 51.8 0.988095238095238 83 40 98.8 0 251 3 334 416 MCL4302270.1 carboxylesterase/lipase family protein [Anaerolineae bacterium] diamond 249 91.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31915533 31915533 PRJNA688414_P_NODE_8257_length_242_cov_0.923077_g8223_i0 PRJNA688414 8257 242 0.923077 2.23384634 Chloroflexota bacterium 2026724 Bacteria Bacteria 70.5 6.21e-12   NR MBW3632565.1 2026724 g8223 i0 75 1.09090909090909 44 11 54.5 0 2 133 703 746 MBW3632565.1 VanW family protein [Chloroflexota bacterium] diamond 264 70.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;