RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA688414" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA688414 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23619874 23619874 PRJNA688414_P_NODE_7279_length_247_cov_0.896552_g7245_i0 PRJNA688414 7279 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 124 1.68e-33   NR OGL15011.1 1802110 g7245 i0 85.4 5.97570850202429 82 12 99.6 0 246 1 36 117 OGL15011.1 MAG: hypothetical protein A3F92_09070 [Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22] diamond 1476 124 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22
27871880 27871880 PRJNA688414_P_NODE_7625_length_245_cov_0.906977_g7591_i0 PRJNA688414 7625 245 0.906977 2.22209365 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 55.5 1.2e-6   NR MBI2204488.1 2053607 g7591 i0 78.8 0.808163265306122 33 7 40.4 0 145 243 1 33 MBI2204488.1 acyl-CoA dehydrogenase family protein [Candidatus Rokuibacteriota bacterium] diamond 198 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31199202 31199202 PRJNA688414_P_NODE_6475_length_251_cov_0.876404_g6441_i0 PRJNA688414 6475 251 0.876404 2.19977404 Bacteria 2 Bacteria Bacteria 68.9 1.87e-11   NR PYM72004.1 2053607 g6441 i0 79.5 0.932270916334661 39 8 46.6 0 250 134 300 338 PYM72004.1 MAG: hypothetical protein DME10_14245 [Candidatus Rokuibacteriota bacterium] diamond 234 69.3 0.994227994227994 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32042157 32042157 PRJNA688414_P_NODE_6998_length_248_cov_0.891429_g6964_i0 PRJNA688414 6998 248 0.891429 2.21074392 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 116 5.559999999999999e-32   NR PYO10930.1 2053607 g6964 i0 78.1 0.883064516129032 73 16 88.3 0 11 229 1 73 PYO10930.1 MAG: hypothetical protein DMD75_12250 [Candidatus Rokuibacteriota bacterium] diamond 219 116 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;