RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA688414" and tax_kingdom = "Fungi"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA688414 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28325398 28325398 PRJNA688414_P_NODE_6426_length_251_cov_0.876404_g6392_i0 PRJNA688414 6426 251 0.876404 2.19977404 Polyporales 5303 Fungi Fungi 76.3 6.46e-14   NR PSR75788.1 98765 g6392 i0 85 3.35856573705179 40 6 47.8 0 21 140 375 414 PSR75788.1 hypothetical protein PHLCEN_2v8905 [Hermanssonia centrifuga] diamond 843 76.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Meruliaceae Hermanssonia Hermanssonia centrifuga
29450374 29450374 PRJNA688414_P_NODE_7130_length_248_cov_0.891429_g7096_i0 PRJNA688414 7130 248 0.891429 2.21074392 Setomelanomma holmii 210430 Fungi Fungi 162 7.249999999999999e-45   NR KAF2023980.1 210430 g7096 i0 97.6 0.991935483870968 82 2 99.2 0 247 2 97 178 KAF2023980.1 phenylalanyl-tRNA synthetase beta chain [Setomelanomma holmii] diamond 246 162 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Setomelanomma Setomelanomma holmii
30714105 30714105 PRJNA688414_P_NODE_8314_length_242_cov_0.923077_g8280_i0 PRJNA688414 8314 242 0.923077 2.23384634 Exophiala mesophila 212818 Fungi Fungi 66.6 1.37e-10   NR XP_016229435.1 212818 g8280 i0 72.7 3 44 12 54.5 0 109 240 14 57 XP_016229435.1 hypothetical protein, variant [Exophiala mesophila] diamond 726 66.6 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala mesophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;