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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA688414" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 13 ✖

bioproject 1

  • PRJNA688414 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10871108 10871108 PRJNA688414_P_NODE_8389_length_242_cov_0.857988_g8355_i0 PRJNA688414 8389 242 0.857988 2.07633096 root 1 Root_unresolved Root_unresolved 144 6.9e-40   NR HMB87735.1 2072417 g8355 i0 90 7.93388429752066 80 8 99.2 0 241 2 115 194 HMB87735.1 sigma-54 dependent transcriptional regulator [Candidatus Methylomirabilota bacterium] diamond 1920 145 0.993103448275862 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
23619874 23619874 PRJNA688414_P_NODE_7279_length_247_cov_0.896552_g7245_i0 PRJNA688414 7279 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 124 1.68e-33   NR OGL15011.1 1802110 g7245 i0 85.4 5.97570850202429 82 12 99.6 0 246 1 36 117 OGL15011.1 MAG: hypothetical protein A3F92_09070 [Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22] diamond 1476 124 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22
26924102 26924102 PRJNA688414_P_NODE_7822_length_244_cov_0.912281_g7788_i0 PRJNA688414 7822 244 0.912281 2.22596564 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 136 9.34e-36   NR HEY6367438.1 2838779 g7788 i0 90 0.983606557377049 80 8 98.4 0 242 3 395 474 HEY6367438.1 hypothetical protein [Candidatus Binatia bacterium] diamond 240 136 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27082245 27082245 PRJNA688414_P_NODE_5902_length_253_cov_0.866667_g5868_i0 PRJNA688414 5902 253 0.866667 2.19266751 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 159 1.5099999999999998e-45   NR HEX9271982.1 2838779 g5868 i0 90.5 0.99604743083004 84 8 99.6 0 253 2 107 190 HEX9271982.1 alpha/beta hydrolase [Candidatus Binatia bacterium] diamond 252 159 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27461620 27461620 PRJNA688414_P_NODE_6243_length_252_cov_0.871508_g6209_i0 PRJNA688414 6243 252 0.871508 2.19620016 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 119 1.78e-31   NR HXV78978.1 2838779 g6209 i0 93.5 2.95238095238095 62 4 73.8 0 188 3 1 62 HXV78978.1 amidohydrolase family protein [Candidatus Binatia bacterium] diamond 744 119 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27871880 27871880 PRJNA688414_P_NODE_7625_length_245_cov_0.906977_g7591_i0 PRJNA688414 7625 245 0.906977 2.22209365 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 55.5 1.2e-6   NR MBI2204488.1 2053607 g7591 i0 78.8 0.808163265306122 33 7 40.4 0 145 243 1 33 MBI2204488.1 acyl-CoA dehydrogenase family protein [Candidatus Rokuibacteriota bacterium] diamond 198 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28882198 28882198 PRJNA688414_P_NODE_7208_length_247_cov_0.896552_g7174_i0 PRJNA688414 7208 247 0.896552 2.21448344 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 71.6 2.67e-12   NR HMJ65181.1 2838779 g7174 i0 48.8 0.995951417004049 82 35 99.6 1 246 1 266 340 HMJ65181.1 hypothetical protein [Candidatus Binatia bacterium] diamond 246 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29387617 29387617 PRJNA688414_P_NODE_8369_length_242_cov_0.923077_g8335_i0 PRJNA688414 8369 242 0.923077 2.23384634 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 141 1.2e-37   NR MET0643543.1 2838779 g8335 i0 92.5 1.98347107438017 80 6 99.2 0 242 3 283 362 MET0643543.1 AAA family ATPase [Candidatus Binatia bacterium] diamond 480 141 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29924392 29924392 PRJNA688414_P_NODE_8171_length_243_cov_0.917647_g8137_i0 PRJNA688414 8171 243 0.917647 2.22988221 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 152 2.16e-43   NR HEX2501668.1 2072417 g8137 i0 93.5 0.950617283950617 77 5 95.1 0 11 241 1 77 HEX2501668.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 231 152 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30430167 30430167 PRJNA688414_P_NODE_6553_length_250_cov_0.881356_g6519_i0 PRJNA688414 6553 250 0.881356 2.20339 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 152 3.95e-41   NR HEX9664074.1 2838779 g6519 i0 92.8 0.996 83 6 99.6 0 250 2 524 606 HEX9664074.1 DNA topoisomerase VI subunit B [Candidatus Binatia bacterium] diamond 249 152 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31199202 31199202 PRJNA688414_P_NODE_6475_length_251_cov_0.876404_g6441_i0 PRJNA688414 6475 251 0.876404 2.19977404 Bacteria 2 Bacteria Bacteria 68.9 1.87e-11   NR PYM72004.1 2053607 g6441 i0 79.5 0.932270916334661 39 8 46.6 0 250 134 300 338 PYM72004.1 MAG: hypothetical protein DME10_14245 [Candidatus Rokuibacteriota bacterium] diamond 234 69.3 0.994227994227994 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32042157 32042157 PRJNA688414_P_NODE_6998_length_248_cov_0.891429_g6964_i0 PRJNA688414 6998 248 0.891429 2.21074392 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 116 5.559999999999999e-32   NR PYO10930.1 2053607 g6964 i0 78.1 0.883064516129032 73 16 88.3 0 11 229 1 73 PYO10930.1 MAG: hypothetical protein DMD75_12250 [Candidatus Rokuibacteriota bacterium] diamond 219 116 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32042158 32042158 PRJNA688414_P_NODE_7278_length_247_cov_0.896552_g7244_i0 PRJNA688414 7278 247 0.896552 2.21448344 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 178 7.2099999999999995e-53   NR MET0643711.1 2838779 g7244 i0 97.6 0.995951417004049 82 2 99.6 0 2 247 37 118 MET0643711.1 lipocalin-like domain-containing protein [Candidatus Binatia bacterium] diamond 246 178 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;