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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA688352" and tax_phylum = "Thermotogota"

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tax_superkingdom 1

tax_phylum 1

  • Thermotogota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA688352 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1942897 1942897 PRJNA688352_P_NODE_7722_length_250_cov_0.870056_g7619_i0 PRJNA688352 7722 250 0.870056 2.17514 Petrotogaceae bacterium 2819251 Bacteria Bacteria 140 2.1e-36   NR HOG34777.1 2819251 g7619 i0 100 3.456 72 0 86.4 0 216 1 378 449 HOG34777.1 response regulator [Petrotogaceae bacterium] diamond 864 140 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae   Petrotogaceae bacterium
7045546 7045546 PRJNA688352_P_NODE_7986_length_250_cov_0.870056_g7883_i0 PRJNA688352 7986 250 0.870056 2.17514 Thermotogae 188708 Bacteria Bacteria 173 5.519999999999999e-48   NR HQQ56591.1 2053577 g7883 i0 100 4.98 83 0 99.6 0 250 2 754 836 HQQ56591.1 hypothetical protein [Mesotoga sp.] diamond 1245 173 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
26639033 26639033 PRJNA688352_P_NODE_11721_length_242_cov_0.911243_g11618_i0 PRJNA688352 11721 242 0.911243 2.20520806 Thermotogaceae bacterium 2268206 Bacteria Bacteria 65.5 3.54e-12   NR NLX33236.1 2268206 g11618 i0 100 0.384297520661157 31 0 38.4 0 95 3 1 31 NLX33236.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein [Thermotogaceae bacterium] diamond 93 65.5 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae   Thermotogaceae bacterium
26987199 26987199 PRJNA688352_P_NODE_5942_length_271_cov_1.555556_g5839_i0 PRJNA688352 5942 271 1.555556 4.21555676 Mesotoga sp. 2053577 Bacteria Bacteria 184 1.7299999999999996e-55   NR HQN29238.1 2053577 g5839 i0 100 5.91143911439114 89 0 98.5 0 3 269 180 268 HQN29238.1 YjgP/YjgQ family permease [Mesotoga sp.] diamond 1602 184 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
27366993 27366993 PRJNA688352_P_NODE_8903_length_248_cov_0.880000_g8800_i0 PRJNA688352 8903 248 0.88 2.1824 Mesotoga sp. 2053577 Bacteria Bacteria 100 1.0799999999999999e-24   NR MDD4478506.1 2053577 g8800 i0 100 1.18548387096774 49 0 59.3 0 2 148 102 150 MDD4478506.1 RluA family pseudouridine synthase [Mesotoga sp.] diamond 294 100 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
27524590 27524590 PRJNA688352_P_NODE_7243_length_251_cov_0.865169_g7140_i0 PRJNA688352 7243 251 0.865169 2.17157419 Mesotoga sp. 2053577 Bacteria Bacteria 79.3 1.18e-16   NR HPB64872.1 2053577 g7140 i0 97.4 0.466135458167331 39 1 46.6 0 250 134 99 137 HPB64872.1 YbaK/EbsC family protein [Mesotoga sp.] diamond 117 79.3 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
28661357 28661357 PRJNA688352_P_NODE_9667_length_246_cov_0.890173_g9564_i0 PRJNA688352 9667 246 0.890173 2.18982558 Petrotogaceae bacterium 2819251 Bacteria Bacteria 87.4 6.54e-18   NR HPX16689.1 2819251 g9564 i0 100 2 41 0 50 0 1 123 437 477 HPX16689.1 molybdopterin-dependent oxidoreductase [Petrotogaceae bacterium] diamond 492 87.4 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae   Petrotogaceae bacterium
28693026 28693026 PRJNA688352_P_NODE_12407_length_241_cov_0.916667_g12304_i0 PRJNA688352 12407 241 0.916667 2.20916747 Mesotoga infera 1236046 Bacteria Bacteria 158 5.869999999999998e-47   NR WP_169699785.1 1236046 g12304 i0 96.3 0.995850622406639 80 3 99.6 0 2 241 45 124 WP_169699785.1 deoxynucleoside kinase [Mesotoga infera] diamond 240 158 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga infera
29450371 29450371 PRJNA688352_P_NODE_8290_length_249_cov_0.875000_g8187_i0 PRJNA688352 8290 249 0.875 2.17875 Thermotogaceae bacterium 2268206 Bacteria Bacteria 172 1.02e-53   NR NLX34217.1 2268206 g8187 i0 100 1 83 0 100 0 249 1 10 92 NLX34217.1 glycosyltransferase family 1 protein [Thermotogaceae bacterium] diamond 249 172 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae   Thermotogaceae bacterium
29513576 29513576 PRJNA688352_P_NODE_5010_length_290_cov_1.949309_g4907_i0 PRJNA688352 5010 290 1.949309 5.6529961 Mesotoga prima 1184387 Bacteria Bacteria 189 1.3099999999999995e-55   NR WP_333641396.1 1184387 g4907 i0 100 1.97586206896552 96 0 99.3 0 2 289 29 124 WP_333641396.1 transposase [Mesotoga prima] diamond 573 189 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga prima
29525461 29525461 PRJNA688352_P_NODE_8330_length_249_cov_0.875000_g8227_i0 PRJNA688352 8330 249 0.875 2.17875 Thermotogae 188708 Bacteria Bacteria 160 1.22e-43   NR MDD5743626.1 2053577 g8227 i0 100 3.95180722891566 82 0 98.8 0 2 247 374 455 MDD5743626.1 hypothetical protein [Mesotoga sp.] diamond 984 160 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
29671261 29671261 PRJNA688352_P_NODE_11810_length_242_cov_0.911243_g11707_i0 PRJNA688352 11810 242 0.911243 2.20520806 Mesotoga sp. 2053577 Bacteria Bacteria 129 9.07e-35   NR HPB63487.1 2053577 g11707 i0 100 0.84297520661157 68 0 84.3 0 206 3 1 68 HPB63487.1 NAD/NADP octopine/nopaline dehydrogenase family protein [Mesotoga sp.] diamond 204 129 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
29809395 29809395 PRJNA688352_P_NODE_8571_length_248_cov_0.880000_g8468_i0 PRJNA688352 8571 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 64.3 8.25e-10   NR HPM22242.1 2053689 g8468 i0 96.4 0.67741935483871 28 1 33.9 0 165 248 1 28 HPM22242.1 IS5 family transposase [Thermotogota bacterium] diamond 168 64.3 1 Bacteria   Thermotogati Thermotogota         Thermotogota bacterium
30113744 30113744 PRJNA688352_P_NODE_7652_length_250_cov_0.870056_g7549_i0 PRJNA688352 7652 250 0.870056 2.17514 Petrotogaceae bacterium 2819251 Bacteria Bacteria 173 4.97e-53   NR HQH34038.1 2819251 g7549 i0 98.8 2.988 83 1 99.6 0 250 2 83 165 HQH34038.1 sugar transferase [Petrotogaceae bacterium] diamond 747 173 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae   Petrotogaceae bacterium
30272102 30272102 PRJNA688352_P_NODE_9752_length_246_cov_0.890173_g9649_i0 PRJNA688352 9752 246 0.890173 2.18982558 Petrotogaceae bacterium 2819251 Bacteria Bacteria 170 5.92e-47   NR HPO27047.1 2819251 g9649 i0 100 2 82 0 100 0 1 246 494 575 HPO27047.1 phosphoribosylformylglycinamidine synthase [Petrotogaceae bacterium] diamond 492 170 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae   Petrotogaceae bacterium
30504632 30504632 PRJNA688352_P_NODE_8193_length_249_cov_0.875000_g8090_i0 PRJNA688352 8193 249 0.875 2.17875 Mesotoga 1184396 Bacteria Bacteria 125 2.89e-33   NR WP_183084357.1 1462923 g8090 i0 95.5 3.2289156626506 67 3 80.7 0 248 48 210 276 WP_183084357.1 carbohydrate ABC transporter permease [Mesotoga sp. HF07.pep.5.2.highcov] diamond 804 125 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp. HF07.pep.5.2.highcov
30587612 30587612 PRJNA688352_P_NODE_11053_length_243_cov_0.905882_g10950_i0 PRJNA688352 11053 243 0.905882 2.20129326 Mesotoga sp. 2053577 Bacteria Bacteria 167 1.33e-50   NR HQN27205.1 2053577 g10950 i0 100 0.987654320987654 80 0 98.8 0 241 2 111 190 HQN27205.1 short-chain dehydrogenase [Mesotoga sp.] diamond 240 167 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
31124504 31124504 PRJNA688352_P_NODE_11795_length_242_cov_0.911243_g11692_i0 PRJNA688352 11795 242 0.911243 2.20520806 Mesotoga sp. 2053577 Bacteria Bacteria 157 4.5099999999999985e-47   NR MDD5744723.1 2053577 g11692 i0 100 3.96694214876033 80 0 99.2 0 3 242 91 170 MDD5744723.1 FAD/NAD(P)-binding oxidoreductase [Mesotoga sp.] diamond 960 157 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
31757377 31757377 PRJNA688352_P_NODE_8857_length_248_cov_0.880000_g8754_i0 PRJNA688352 8857 248 0.88 2.1824 Mesotoga sp. 2053577 Bacteria Bacteria 149 1.59e-42   NR MDD5744642.1 2053577 g8754 i0 100 1.98387096774194 82 0 99.2 0 247 2 175 256 MDD5744642.1 TRAP transporter large permease subunit [Mesotoga sp.] diamond 492 149 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
31852156 31852156 PRJNA688352_P_NODE_5597_length_278_cov_1.126829_g5494_i0 PRJNA688352 5597 278 1.126829 3.13258462 Petrotogaceae bacterium 2819251 Bacteria Bacteria 181 3.6899999999999985e-55   NR HNV06217.1 2819251 g5494 i0 100 0.992805755395683 92 0 99.3 0 3 278 88 179 HNV06217.1 MBL fold metallo-hydrolase [Petrotogaceae bacterium] diamond 276 181 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae   Petrotogaceae bacterium
31852157 31852157 PRJNA688352_P_NODE_7777_length_250_cov_0.870056_g7674_i0 PRJNA688352 7777 250 0.870056 2.17514 Mesotoga sp. 2053577 Bacteria Bacteria 156 2.3499999999999992e-43   NR HOI64358.1 2053577 g7674 i0 97.6 0.996 83 2 99.6 0 1 249 294 376 HOI64358.1 DUF4127 family protein [Mesotoga sp.] diamond 249 156 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
32010498 32010498 PRJNA688352_P_NODE_7178_length_251_cov_0.865169_g7075_i0 PRJNA688352 7178 251 0.865169 2.17157419 Mesotoga sp. 2053577 Bacteria Bacteria 103 1.31e-25   NR HPB64423.1 2053577 g7075 i0 100 0.621513944223108 52 0 62.2 0 249 94 123 174 HPB64423.1 winged helix-turn-helix domain-containing protein [Mesotoga sp.] diamond 156 103 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
32200376 32200376 PRJNA688352_P_NODE_9398_length_247_cov_0.885057_g9295_i0 PRJNA688352 9398 247 0.885057 2.18609079 Mesotoga prima 1184387 Bacteria Bacteria 169 4.4999999999999994e-49   NR WP_333642293.1 1184387 g9295 i0 97.6 2.98785425101215 82 2 99.6 0 246 1 71 152 WP_333642293.1 DNA methyltransferase, partial [Mesotoga prima] diamond 738 169 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga prima
32485277 32485277 PRJNA688352_P_NODE_9099_length_247_cov_0.885057_g8996_i0 PRJNA688352 9099 247 0.885057 2.18609079 Mesotoga infera 1236046 Bacteria Bacteria 165 1.6099999999999998e-45   NR HPD39138.1 1236046 g8996 i0 98.8 0.983805668016194 81 1 98.4 0 245 3 239 319 HPD39138.1 TIGR03986 family CRISPR-associated RAMP protein [Mesotoga infera] diamond 243 165 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga infera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;