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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA688352" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688352 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21069268 21069268 PRJNA688352_P_NODE_10717_length_244_cov_0.900585_g10614_i0 PRJNA688352 10717 244 0.900585 2.1974274 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 85.9 2.15e-19   NR MBN1293365.1 2053570 g10614 i0 82.2 1.65983606557377 45 8 55.3 0 1 135 76 120 MBN1293365.1 mechanosensitive ion channel family protein [Candidatus Latescibacterota bacterium] diamond 405 85.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
21579032 21579032 PRJNA688352_P_NODE_9817_length_246_cov_0.890173_g9714_i0 PRJNA688352 9817 246 0.890173 2.18982558 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 111 1.43e-26   NR MEW6750391.1 2053570 g9714 i0 74.2 1.60975609756098 66 17 80.5 0 200 3 1 66 MEW6750391.1 bifunctional response regulator/alkaline phosphatase family protein [Candidatus Latescibacterota bacterium] diamond 396 111 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28314026 28314026 PRJNA688352_P_NODE_9706_length_246_cov_0.890173_g9603_i0 PRJNA688352 9706 246 0.890173 2.18982558 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 107 4.24e-25   NR MEE2753201.1 2053570 g9603 i0 61.6 3.10975609756098 86 29 100 1 1 246 135 220 MEE2753201.1 sulfatase-like hydrolase/transferase [Candidatus Latescibacterota bacterium] diamond 765 107 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29651212 29651212 PRJNA688352_P_NODE_11590_length_242_cov_0.911243_g11487_i0 PRJNA688352 11590 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 132 1.5e-34   NR NIO00778.1 2053570 g11487 i0 81 16.7479338842975 79 15 97.9 0 3 239 85 163 NIO00778.1 glutamate-1-semialdehyde 2,1-aminomutase [Candidatus Latescibacterota bacterium] diamond 4053 132 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32200375 32200375 PRJNA688352_P_NODE_8398_length_249_cov_0.875000_g8295_i0 PRJNA688352 8398 249 0.875 2.17875 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 91.3 1.97e-19   NR MFH1006284.1 2053570 g8295 i0 58.5 0.987951807228916 82 33 98.8 1 246 1 164 244 MFH1006284.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 246 91.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32295605 32295605 PRJNA688352_P_NODE_12099_length_241_cov_0.916667_g11996_i0 PRJNA688352 12099 241 0.916667 2.20916747 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 90.9 5.04e-20   NR MEW6753756.1 2053570 g11996 i0 57.1 0.95850622406639 77 33 95.9 0 232 2 92 168 MEW6753756.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 231 90.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32580169 32580169 PRJNA688352_P_NODE_11819_length_242_cov_0.911243_g11716_i0 PRJNA688352 11819 242 0.911243 2.20520806 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 127 7.159999999999998e-35   NR MBI4552421.1 2053570 g11716 i0 70.5 0.966942148760331 78 23 96.7 0 2 235 136 213 MBI4552421.1 DUF1080 domain-containing protein [Candidatus Latescibacterota bacterium] diamond 234 127 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;