RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA688352" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688352 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27240189 27240189 PRJNA688352_P_NODE_7063_length_251_cov_0.865169_g6960_i0 PRJNA688352 7063 251 0.865169 2.17157419 Euphydryas editha 104508 Arthropoda Arthropoda 44.3 0.0121   NR CAH2084649.1 104508 g6960 i0 35.3 3.19123505976096 51 33 61 0 3 155 296 346 CAH2084649.1 unnamed protein product [Euphydryas editha] diamond 801 44.3 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Nymphalidae Euphydryas Euphydryas editha
29892886 29892886 PRJNA688352_P_NODE_10211_length_245_cov_0.895349_g10108_i0 PRJNA688352 10211 245 0.895349 2.19360505 Cordylochernes scorpioides 51811 Arthropoda Arthropoda 41.2 0.0178   NR UYV63843.1 51811 g10108 i0 48.4 0.379591836734694 31 16 38 0 205 113 15 45 UYV63843.1 hypothetical protein LAZ67_2005794 [Cordylochernes scorpioides] diamond 93 41.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Pseudoscorpiones Chernetidae Cordylochernes Cordylochernes scorpioides
30650709 30650709 PRJNA688352_P_NODE_7853_length_250_cov_0.870056_g7750_i0 PRJNA688352 7853 250 0.870056 2.17514 Eurytemora carolleeae 1294199 Arthropoda Arthropoda 72.8 5.36e-13   NR XP_023343148.1 1294199 g7750 i0 61.8 0.912 76 24 91.2 3 6 233 163 233 XP_023343148.1 uncharacterized protein LOC111712695 [Eurytemora carolleeae] diamond 228 72.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Hexanauplia Calanoida Temoridae Eurytemora Eurytemora carolleeae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;