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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA685607" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA685607 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7045107 7045107 PRJNA685607_P_NODE_77006_length_247_cov_0.885057_g76647_i0 PRJNA685607 77006 247 0.885057 2.18609079 Arcella hemisphaerica 497998 Tubulinea other_Eukaryota 142 3.5099999999999993e-40   NR ACA04822.1 497998 g76647 i0 82.3 1.91902834008097 79 14 96 0 246 10 59 137 ACA04822.1 alpha-tubulin, partial [Arcella hemisphaerica] diamond 474 142 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Arcellidae Arcella Arcella hemisphaerica
8319347 8319347 PRJNA685607_P_NODE_1047_length_1601_cov_5.287958_g912_i0 PRJNA685607 1047 1601 5.287958 84.66020758 Copromyxa protea 931554 Tubulinea other_Eukaryota 757 8.169999999999998e-272   NR BAN33737.1 931554 g912 i0 79.3 0.86945658963148 464 91 86 1 1566 190 1 464 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 1392 757 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
10104768 10104768 PRJNA685607_P_NODE_14428_length_424_cov_2.584046_g14070_i0 PRJNA685607 14428 424 2.584046 10.95635504 Amoeba proteus 5775 Tubulinea other_Eukaryota 235 6.16e-74   NR AAP88974.1 5775 g14070 i0 82.3 0.919811320754717 130 23 92 0 31 420 7 136 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 390 235 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
15969025 15969025 PRJNA685607_P_NODE_4693_length_716_cov_1.511664_g4365_i0 PRJNA685607 4693 716 1.511664 10.82351424 Amoeba proteus 5775 Tubulinea other_Eukaryota 370 4.239999999999999e-125   NR AAP88974.1 5775 g4365 i0 81.3 1.88128491620112 224 40 93.9 1 715 44 169 390 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 1347 370 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
17244214 17244214 PRJNA685607_P_NODE_1614_length_1283_cov_4.082645_g1426_i0 PRJNA685607 1614 1283 4.082645 52.38033535 Copromyxa protea 931554 Tubulinea other_Eukaryota 693 2.3999999999999992e-248   NR BAN33737.1 931554 g1426 i0 80.1 5.85035074045207 422 78 97.3 1 34 1281 1 422 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 7506 693 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
18518432 18518432 PRJNA685607_P_NODE_56415_length_266_cov_1.196891_g56056_i0 PRJNA685607 56415 266 1.196891 3.18373006 Amoeba proteus 5775 Tubulinea other_Eukaryota 136 1.87e-36   NR AAP88974.1 5775 g56056 i0 80.3 0.857142857142857 76 15 85.7 0 261 34 83 158 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 228 136 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
21068652 21068652 PRJNA685607_P_NODE_1077_length_1584_cov_5.450033_g912_i1 PRJNA685607 1077 1584 5.450033 86.32852272 Copromyxa protea 931554 Tubulinea other_Eukaryota 758 4.7399999999999985e-272   NR BAN33737.1 931554 g912 i1 79.3 0.878787878787879 464 91 86.9 1 19 1395 1 464 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 1392 758 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
21068681 21068681 PRJNA685607_P_NODE_18237_length_389_cov_1.218354_g17879_i0 PRJNA685607 18237 389 1.218354 4.73939706 Chaos carolinense 160823 Tubulinea other_Eukaryota 197 1.29e-60   NR AFX73090.1 160823 g17879 i0 75.2 1.98971722365039 129 32 99.5 0 2 388 3 131 AFX73090.1 elongation factor 2 alpha, partial [Chaos carolinense] diamond 774 197 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
23619122 23619122 PRJNA685607_P_NODE_21859_length_365_cov_1.263699_g21500_i0 PRJNA685607 21859 365 1.263699 4.61250135 Amoeba proteus 5775 Tubulinea other_Eukaryota 204 2.17e-63   NR AFX84537.1 5775 g21500 i0 79.3 0.994520547945206 121 25 99.5 0 365 3 122 242 AFX84537.1 alpha tubulin, partial [Amoeba proteus] diamond 363 204 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
26733639 26733639 PRJNA685607_P_NODE_11001_length_474_cov_1.331671_g10645_i0 PRJNA685607 11001 474 1.331671 6.31212054 Saccamoeba lacustris 704142 Tubulinea other_Eukaryota 209 1.05e-64   NR AFX73097.1 704142 g10645 i0 64.7 3.95569620253165 156 51 98.7 1 470 3 83 234 AFX73097.1 elongation factor 2 alpha, partial [Saccamoeba lacustris] diamond 1875 209 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba lacustris
28830571 28830571 PRJNA685607_P_NODE_58568_length_262_cov_1.222222_g58209_i0 PRJNA685607 58568 262 1.222222 3.20222164 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 140 3.16e-37   NR BAN33737.1 931554 g58209 i0 77 5.97709923664122 87 20 99.6 0 262 2 7 93 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 1566 140 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
28945665 28945665 PRJNA685607_P_NODE_27788_length_338_cov_1.120755_g27429_i0 PRJNA685607 27788 338 1.120755 3.7881519 Amoeba proteus 5775 Tubulinea other_Eukaryota 115 4.83e-27   NR AAD33718.1 5775 g27429 i0 50.9 1.01183431952663 114 51 99.4 2 336 1 737 847 AAD33718.1 myosin heavy chain [Amoeba proteus] diamond 342 115 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
30745736 30745736 PRJNA685607_P_NODE_92194_length_242_cov_0.911243_g91835_i0 PRJNA685607 92194 242 0.911243 2.20520806 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 127 3.1e-33   NR AAY34140.1 5778 g91835 i0 85 0.991735537190083 80 12 99.2 0 240 1 256 335 AAY34140.1 Nop58p, partial [Vermamoeba vermiformis] diamond 240 127 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
32642623 32642623 PRJNA685607_P_NODE_39900_length_300_cov_1.867841_g39541_i0 PRJNA685607 39900 300 1.867841 5.603523 Copromyxa protea 931554 Tubulinea other_Eukaryota 171 5.28e-49   NR BAN33737.1 931554 g39541 i0 79 1 100 21 100 0 300 1 312 411 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 300 171 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;