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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA685607" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA685607 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4494258 4494258 PRJNA685607_P_NODE_48904_length_280_cov_1.570048_g48545_i0 PRJNA685607 48904 280 1.570048 4.3961344 root 1 Root_unresolved Root_unresolved 174 1.2099999999999997e-52   NR WP_321130271.1 1496 g48545 i0 89.2 2.98928571428571 93 10 99.6 0 280 2 131 223 WP_321130271.1 GTP-binding protein, partial [Clostridioides difficile] diamond 837 174 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Clostridioides Clostridioides difficile
4494379 4494379 PRJNA685607_P_NODE_80384_length_246_cov_0.890173_g80025_i0 PRJNA685607 80384 246 0.890173 2.18982558 Atopostipes suicloacalis 180295 Bacteria Bacteria 110 8.14e-28   NR WP_073297867.1 180295 g80025 i0 76.4 1.75609756097561 72 17 87.8 0 31 246 159 230 WP_073297867.1 CpsD/CapB family tyrosine-protein kinase [Atopostipes suicloacalis] diamond 432 110 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Atopostipes Atopostipes suicloacalis
12145765 12145765 PRJNA685607_P_NODE_7230_length_572_cov_1.322645_g6876_i0 PRJNA685607 7230 572 1.322645 7.5655294 Polycladomyces 1348505 Bacteria Bacteria 191 3.4499999999999985e-55   NR WP_212773502.1 1348505 g6876 i0 58.4 5.08216783216783 161 66 83.9 1 480 1 4 164 WP_212773502.1 MULTISPECIES: F0F1 ATP synthase subunit beta [Polycladomyces] diamond 2907 191 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Thermoactinomycetaceae Polycladomyces  
13420341 13420341 PRJNA685607_P_NODE_70491_length_249_cov_0.875000_g70132_i0 PRJNA685607 70491 249 0.875 2.17875 Alkalibacterium sp. s-m-22 3397071 Bacteria Bacteria 123 3.47e-31   NR GAB2318300.1 3397071 g70132 i0 75.6 0.987951807228916 82 20 98.8 0 1 246 236 317 GAB2318300.1 RNA-guided endonuclease TnpB family protein [Alkalibacterium sp. s-m-22] diamond 246 123 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Alkalibacterium Alkalibacterium sp. s-m-22
17244323 17244323 PRJNA685607_P_NODE_59294_length_261_cov_1.005319_g58935_i0 PRJNA685607 59294 261 1.005319 2.62388259 Clostridia bacterium 2044939 Bacteria Bacteria 98.6 3.6300000000000003e-22   NR MEG1142135.1 2044939 g58935 i0 94 0.574712643678161 50 3 57.5 0 261 112 267 316 MEG1142135.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB [Clostridia bacterium] diamond 150 98.6 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
22853681 22853681 PRJNA685607_P_NODE_36038_length_311_cov_1.201681_g35679_i0 PRJNA685607 36038 311 1.201681 3.73722791 Defluviitaleaceae bacterium 2660712 Bacteria Bacteria 147 5.87e-41   NR MCL2365139.1 2660712 g35679 i0 72.2 11.3922829581994 97 26 92.6 1 24 311 113 209 MCL2365139.1 type I glyceraldehyde-3-phosphate dehydrogenase [Defluviitaleaceae bacterium] diamond 3543 147 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Defluviitaleaceae   Defluviitaleaceae bacterium
23619340 23619340 PRJNA685607_P_NODE_90139_length_243_cov_0.905882_g89780_i0 PRJNA685607 90139 243 0.905882 2.20129326 Eremococcus coleocola 88132 Bacteria Bacteria 119 5.69e-29   NR WP_028125082.1 88132 g89780 i0 84.8 0.814814814814815 66 10 81.5 0 242 45 528 593 WP_028125082.1 ribonuclease R [Eremococcus coleocola] diamond 198 119 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae Eremococcus Eremococcus coleocola
26639025 26639025 PRJNA685607_P_NODE_38301_length_305_cov_0.991379_g37942_i0 PRJNA685607 38301 305 0.991379 3.02370595 Saccharofermentans sp. 2775029 Bacteria Bacteria 43.1 0.0458   NR MCR5594143.1 2775029 g37942 i0 40 0.590163934426229 60 36 59 0 278 99 44 103 MCR5594143.1 glycosyltransferase family 2 protein [Saccharofermentans sp.] diamond 180 43.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Saccharofermentans Saccharofermentans sp.
26639026 26639026 PRJNA685607_P_NODE_86521_length_244_cov_0.900585_g86162_i0 PRJNA685607 86521 244 0.900585 2.1974274 Brevibacillus migulae 1644114 Bacteria Bacteria 128 2.41e-35   NR WP_134687178.1 1644114 g86162 i0 70.4 0.995901639344262 81 24 99.6 0 1 243 31 111 WP_134687178.1 nicotinate-nucleotide adenylyltransferase [Brevibacillus migulae] diamond 243 128 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus migulae
27050681 27050681 PRJNA685607_P_NODE_45222_length_288_cov_1.097674_g44863_i0 PRJNA685607 45222 288 1.097674 3.16130112 Leuconostoc lactis 1246 Bacteria Bacteria 182 1.15e-54   NR WP_146975676.1 1246 g44863 i0 88.5 1 96 11 100 0 1 288 74 169 WP_146975676.1 peptide chain release factor N(5)-glutamine methyltransferase [Leuconostoc lactis] diamond 288 182 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc lactis
27840114 27840114 PRJNA685607_P_NODE_46604_length_285_cov_1.259434_g46245_i0 PRJNA685607 46604 285 1.259434 3.5893869 Psychrobacillus sp. 1871623 Bacteria Bacteria 75.1 2.6e-15   NR MER2010372.1 1871623 g46245 i0 87.2 0.494736842105263 47 6 49.5 0 2 142 46 92 MER2010372.1 DUF2523 family protein [Psychrobacillus sp.] diamond 141 75.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Psychrobacillus Psychrobacillus sp.
28250649 28250649 PRJNA685607_P_NODE_74726_length_248_cov_0.880000_g74367_i0 PRJNA685607 74726 248 0.88 2.1824 Psychrobacillus sp. FSL K6-4615 2921551 Bacteria Bacteria 57.8 2.03e-7   NR WP_340913466.1 2921551 g74367 i0 41.3 1.81451612903226 80 45 94.4 2 238 5 787 866 WP_340913466.1 type IV secretion system protein [Psychrobacillus sp. FSL K6-4615] diamond 450 57.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Psychrobacillus Psychrobacillus sp. FSL K6-4615
28925299 28925299 PRJNA685607_P_NODE_88828_length_243_cov_0.905882_g88469_i0 PRJNA685607 88828 243 0.905882 2.20129326 Bacillus 1386 Bacteria Bacteria 76.3 5.79e-14   NR WP_230631812.1 1386 g88469 i0 48.8 3.95061728395062 80 34 98.8 2 3 242 154 226 WP_230631812.1 MULTISPECIES: MFS transporter [Bacillus] diamond 960 76.3 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus  
29008914 29008914 PRJNA685607_P_NODE_47848_length_282_cov_2.028708_g47489_i0 PRJNA685607 47848 282 2.028708 5.72095656 uncultured Anaerococcus sp. 293428 Bacteria Bacteria 175 1.4599999999999998e-48   NR WP_297281582.1 293428 g47489 i0 95.7 0.98936170212766 93 4 98.9 0 280 2 832 924 WP_297281582.1 penicillin-binding transpeptidase domain-containing protein [uncultured Anaerococcus sp.] diamond 279 175 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus uncultured Anaerococcus sp.
29051914 29051914 PRJNA685607_P_NODE_82308_length_245_cov_0.895349_g81949_i0 PRJNA685607 82308 245 0.895349 2.19360505 Hungatella 1649459 Bacteria Bacteria 57 2.2e-7   NR MBQ1250411.1 2044939 g81949 i0 48.4 3.51428571428571 64 29 74.7 2 63 245 8 70 MBQ1250411.1 polysaccharide deacetylase family protein [Clostridia bacterium] diamond 861 57 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
29229805 29229805 PRJNA685607_P_NODE_51909_length_274_cov_1.532338_g51550_i0 PRJNA685607 51909 274 1.532338 4.19860612 Salipaludibacillus keqinensis 2045207 Bacteria Bacteria 44.3 0.0134   NR WP_110609085.1 2045207 g51550 i0 32.8 0.700729927007299 64 35 70.1 2 69 260 139 194 WP_110609085.1 hypothetical protein [Salipaludibacillus keqinensis] diamond 192 44.3 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Salipaludibacillus Salipaludibacillus keqinensis
29367538 29367538 PRJNA685607_P_NODE_84149_length_245_cov_0.895349_g83790_i0 PRJNA685607 84149 245 0.895349 2.19360505 Bacillati 1783272 Bacteria Bacteria 57 3.68e-7   NR WP_046340380.1 1509 g83790 i0 45.9 7.39591836734694 74 38 90.6 1 244 23 894 965 WP_046340380.1 DUF6923 family protein [Clostridium sporogenes] diamond 1812 57 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sporogenes
29387601 29387601 PRJNA685607_P_NODE_83429_length_245_cov_0.895349_g83070_i0 PRJNA685607 83429 245 0.895349 2.19360505 Limnochorda 1676651 Bacteria Bacteria 122 3.92e-33   NR WP_304173211.1 1676651 g83070 i0 77.9 0.942857142857143 77 17 94.3 0 245 15 92 168 WP_304173211.1 MULTISPECIES: hypothetical protein [Limnochorda] diamond 231 122 1 Bacteria   Bacillati Bacillota Limnochordia Limnochordales Limnochordaceae Limnochorda  
29418903 29418903 PRJNA685607_P_NODE_95169_length_241_cov_0.916667_g94810_i0 PRJNA685607 95169 241 0.916667 2.20916747 Sinobaca qinghaiensis 342944 Bacteria Bacteria 150 1.02e-40   NR WP_120193782.1 342944 g94810 i0 91.1 0.983402489626556 79 7 98.3 0 240 4 266 344 WP_120193782.1 PucR family transcriptional regulator [Sinobaca qinghaiensis] diamond 237 150 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Sporolactobacillaceae Sinobaca Sinobaca qinghaiensis
29734460 29734460 PRJNA685607_P_NODE_63850_length_253_cov_0.794444_g63491_i0 PRJNA685607 63850 253 0.794444 2.00994332 Paenibacillus sp. 58172 Bacteria Bacteria 42.7 0.0276   NR MCL6603914.1 58172 g63491 i0 28.7 1.03162055335968 87 45 83 2 22 231 5 91 MCL6603914.1 hypothetical protein [Paenibacillus sp.] diamond 261 42.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp.
30220131 30220131 PRJNA685607_P_NODE_87452_length_244_cov_0.900585_g87093_i0 PRJNA685607 87452 244 0.900585 2.1974274 Brevibacillus 55080 Bacteria Bacteria 138 5.77e-39   NR WP_134684220.1 1644114 g87093 i0 83.5 3.88524590163934 79 13 97.1 0 239 3 5 83 WP_134684220.1 methylthioribulose 1-phosphate dehydratase [Brevibacillus migulae] diamond 948 138 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus migulae
30682333 30682333 PRJNA685607_P_NODE_86193_length_244_cov_0.900585_g85834_i0 PRJNA685607 86193 244 0.900585 2.1974274 Clostridium sp. AM29-11AC 2293028 Bacteria Bacteria 126 1.16e-32   NR WP_118751023.1 2293028 g85834 i0 84 0.922131147540984 75 12 92.2 0 242 18 58 132 WP_118751023.1 AAA family ATPase [Clostridium sp. AM29-11AC] diamond 225 126 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sp. AM29-11AC
31536182 31536182 PRJNA685607_P_NODE_57576_length_264_cov_0.984293_g57217_i0 PRJNA685607 57576 264 0.984293 2.59853352 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 55.1 1.96e-6   NR MEI3363994.1 2485925 g57217 i0 47.2 0.602272727272727 53 28 60.2 0 3 161 35 87 MEI3363994.1 SEL1-like repeat protein [Oscillospiraceae bacterium] diamond 159 55.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
31694073 31694073 PRJNA685607_P_NODE_86477_length_244_cov_0.900585_g86118_i0 PRJNA685607 86477 244 0.900585 2.1974274 Brevibacillus migulae 1644114 Bacteria Bacteria 153 4.55e-41   NR WP_134683960.1 1644114 g86118 i0 95.1 5.93852459016393 81 4 99.6 0 243 1 499 579 WP_134683960.1 FdhF/YdeP family oxidoreductase [Brevibacillus migulae] diamond 1449 153 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus migulae
31820501 31820501 PRJNA685607_P_NODE_44197_length_290_cov_1.142857_g43838_i0 PRJNA685607 44197 290 1.142857 3.3142853 Clostridia bacterium 2044939 Bacteria Bacteria 113 3.55e-27   NR MBX6377902.1 2044939 g43838 i0 63.4 0.848275862068966 82 30 84.8 0 34 279 39 120 MBX6377902.1 F0F1 ATP synthase subunit beta [Clostridia bacterium] diamond 246 113 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
31915513 31915513 PRJNA685607_P_NODE_88657_length_243_cov_0.905882_g88298_i0 PRJNA685607 88657 243 0.905882 2.20129326 Eubacteriales bacterium 2831996 Bacteria Bacteria 125 1.03e-32   NR MDD4492892.1 2831996 g88298 i0 74.1 1 81 21 100 0 1 243 45 125 MDD4492892.1 DUF3991 and TOPRIM domain-containing protein [Eubacteriales bacterium] diamond 243 125 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Eubacteriales bacterium
32295590 32295590 PRJNA685607_P_NODE_72539_length_249_cov_0.875000_g72180_i0 PRJNA685607 72539 249 0.875 2.17875 Chryseomicrobium palamuruense 682973 Bacteria Bacteria 149 1.3499999999999997e-42   NR WP_378141047.1 682973 g72180 i0 92.7 1.97590361445783 82 6 98.8 0 248 3 42 123 WP_378141047.1 ammonia-dependent NAD(+) synthetase [Chryseomicrobium palamuruense] diamond 492 149 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Caryophanaceae Chryseomicrobium Chryseomicrobium palamuruense
32421823 32421823 PRJNA685607_P_NODE_88919_length_243_cov_0.905882_g88560_i0 PRJNA685607 88919 243 0.905882 2.20129326 Tissierellia bacterium 2049431 Bacteria Bacteria 43.1 0.0259   NR NLY08297.1 2049431 g88560 i0 34.5 0.716049382716049 58 38 71.6 0 9 182 99 156 NLY08297.1 DUF697 domain-containing protein [Tissierellia bacterium] diamond 174 43.1 1 Bacteria   Bacillati Bacillota Tissierellia       Tissierellia bacterium
32516962 32516962 PRJNA685607_P_NODE_60859_length_258_cov_1.167568_g60500_i0 PRJNA685607 60859 258 1.167568 3.01232544 Staphylococcus capitis 29388 Bacteria Bacteria 171 1.03e-51   NR WP_168992924.1 29388 g60500 i0 98.8 1 86 1 100 0 258 1 67 152 WP_168992924.1 hypothetical protein [Staphylococcus capitis] diamond 258 171 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus capitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;