RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA685607" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJNA685607 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24892437 24892437 PRJNA685607_P_NODE_46380_length_285_cov_2.188679_g46021_i0 PRJNA685607 46380 285 2.188679 6.23773515 Candidatus Naiadarchaeum limnaeum 2756139 Archaea Archaea 80.1 2.47e-16   NR HIK00950.1 2756139 g46021 i0 52.1 3.61052631578947 71 34 74.7 0 30 242 70 140 HIK00950.1 30S ribosomal protein S19e [Candidatus Naiadarchaeum limnaeum] diamond 1029 80.1 1 Archaea   Nanobdellati Candidatus Undinarchaeota Candidatus Undinarchaeia Candidatus Naiadarchaeales Candidatus Naiadarchaeaceae Candidatus Naiadarchaeum Candidatus Naiadarchaeum limnaeum
27840119 27840119 PRJNA685607_P_NODE_82144_length_245_cov_1.302326_g81785_i0 PRJNA685607 82144 245 1.302326 3.1906987 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 120 1.2599999999999998e-29   NR RLG70046.1 2026736 g81785 i0 75.3 0.942857142857143 77 19 94.3 0 1 231 559 635 RLG70046.1 MAG: pyruvate, phosphate dikinase [Candidatus Iainarchaeum archaeon] diamond 231 120 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
28503402 28503402 PRJNA685607_P_NODE_51607_length_275_cov_1.143564_g51248_i0 PRJNA685607 51607 275 1.143564 3.144801 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 60.1 2.61e-9   NR MBI4019795.1 3121606 g51248 i0 47.9 2.41090909090909 73 35 79.6 2 271 53 36 105 MBI4019795.1 40S ribosomal protein S19 [Candidatus Aenigmatarchaeota archaeon] diamond 663 60.1 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;