RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA685060" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 6 ✖

bioproject 1

  • PRJNA685060 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3216994 3216994 PRJNA685060_P_NODE_11943_length_269_cov_2.637755_g11853_i0 PRJNA685060 11943 269 2.637755 7.09556095 Gordonia phage ObLaDi 2978487 Viruses Viruses 89 4.66e-20   NR UXE03743.1 2978487 g11853 i0 56.3 2.23048327137546 71 31 79.2 0 39 251 62 132 UXE03743.1 HNH endonuclease [Gordonia phage ObLaDi] diamond 600 89 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Kruegerviridae Cafassovirus Cafassovirus obladi
27050678 27050678 PRJNA685060_P_NODE_7742_length_342_cov_1.717472_g7652_i0 PRJNA685060 7742 342 1.717472 5.87375424 Siphoviridae sp. ctCIv11 2827806 Viruses Viruses 50.4 1.66e-4   NR DAF44839.1 2827806 g7652 i0 33.3 0.684210526315789 78 49 67.5 2 18 248 159 234 DAF44839.1 MAG TPA: HD domain [Siphoviridae sp. ctCIv11] diamond 234 50.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ctCIv11
27524560 27524560 PRJNA685060_P_NODE_1843_length_731_cov_2.156535_g1761_i0 PRJNA685060 1843 731 2.156535 15.76427085 Sobelivirales sp. 2809868 Viruses Viruses 184 9.49e-52   NR WRQ64934.1 2809868 g1761 i0 57.1 0.640218878248974 156 54 61.6 3 1 450 277 425 WRQ64934.1 RNA-dependent RNA polymerase [Sobelivirales sp.] diamond 468 184 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales     Sobelivirales sp.
29702782 29702782 PRJNA685060_P_NODE_1790_length_743_cov_2.150746_g1708_i0 PRJNA685060 1790 743 2.150746 15.98004278 Sobelivirales sp. 2809868 Viruses Viruses 236 2.19e-72   NR WRQ64935.1 2809868 g1708 i0 50.2 1.00538358008075 249 118 99.7 5 1 741 67 311 WRQ64935.1 structural protein, partial [Sobelivirales sp.] diamond 747 236 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales     Sobelivirales sp.
30430119 30430119 PRJNA685060_P_NODE_12513_length_262_cov_1.010582_g12423_i0 PRJNA685060 12513 262 1.010582 2.64772484 Sobelivirales sp. 2809868 Viruses Viruses 78.6 1.04e-14   NR WRQ64934.1 2809868 g12423 i0 44.8 0.99618320610687 87 48 99.6 0 261 1 63 149 WRQ64934.1 RNA-dependent RNA polymerase [Sobelivirales sp.] diamond 261 78.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales     Sobelivirales sp.
32516958 32516958 PRJNA685060_P_NODE_9939_length_299_cov_2.367257_g9849_i0 PRJNA685060 9939 299 2.367257 7.07809843 Rhabdoviridae sp. 1955137 Viruses Viruses 69.7 2.34e-11   NR XKB76561.1 1955137 g9849 i0 37.1 0.973244147157191 97 60 96.3 1 298 11 282 378 XKB76561.1 MAG: hypothetical protein [Rhabdoviridae sp.] diamond 291 69.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Rhabdoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;