RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA685060" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA685060 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3216994 3216994 PRJNA685060_P_NODE_11943_length_269_cov_2.637755_g11853_i0 PRJNA685060 11943 269 2.637755 7.09556095 Gordonia phage ObLaDi 2978487 Viruses Viruses 89 4.66e-20   NR UXE03743.1 2978487 g11853 i0 56.3 2.23048327137546 71 31 79.2 0 39 251 62 132 UXE03743.1 HNH endonuclease [Gordonia phage ObLaDi] diamond 600 89 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Kruegerviridae Cafassovirus Cafassovirus obladi
27050678 27050678 PRJNA685060_P_NODE_7742_length_342_cov_1.717472_g7652_i0 PRJNA685060 7742 342 1.717472 5.87375424 Siphoviridae sp. ctCIv11 2827806 Viruses Viruses 50.4 1.66e-4   NR DAF44839.1 2827806 g7652 i0 33.3 0.684210526315789 78 49 67.5 2 18 248 159 234 DAF44839.1 MAG TPA: HD domain [Siphoviridae sp. ctCIv11] diamond 234 50.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ctCIv11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;