RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA685060" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA685060 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5769788 5769788 PRJNA685060_P_NODE_15185_length_247_cov_0.885057_g15095_i0 PRJNA685060 15185 247 0.885057 2.18609079 Malassezia psittaci 1821823 Fungi Fungi 157 1.01e-44   NR WFD42707.1 1821823 g15095 i0 82.9 1.9919028340081 82 14 99.6 0 1 246 19 100 WFD42707.1 branched-chain-amino-acid transaminase [Malassezia psittaci] diamond 492 157 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia psittaci
8319312 8319312 PRJNA685060_P_NODE_5367_length_415_cov_1.178363_g5277_i0 PRJNA685060 5367 415 1.178363 4.89020645 Cronartium quercuum f. sp. fusiforme G11 708437 Fungi Fungi 54.3 1.94e-5   NR KAG0146896.1 708437 g5277 i0 37.5 0.867469879518072 120 65 86.7 4 2 361 257 366 KAG0146896.1 hypothetical protein CROQUDRAFT_656691 [Cronartium quercuum f. sp. fusiforme G11] diamond 360 54.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Coleosporiaceae Cronartium Cronartium quercuum
27030519 27030519 PRJNA685060_P_NODE_11782_length_272_cov_1.261307_g11692_i0 PRJNA685060 11782 272 1.261307 3.43075504 Polyporaceae 5317 Fungi Fungi 67.4 1.1e-10   NR KAI0778305.1 526244 g11692 i0 33.7 4.88602941176471 89 59 98.2 0 6 272 332 420 KAI0778305.1 WD40 repeat-like protein [Trametes elegans] diamond 1329 67.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes elegans
27651000 27651000 PRJNA685060_P_NODE_15064_length_247_cov_0.885057_g14974_i0 PRJNA685060 15064 247 0.885057 2.18609079 Malassezia cuniculi 948313 Fungi Fungi 58.2 1.24e-7   NR WFD33679.1 948313 g14974 i0 40 6.41295546558704 75 42 87.4 1 22 237 127 201 WFD33679.1 multicatalytic endopeptidase [Malassezia cuniculi] diamond 1584 58.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia cuniculi
27662625 27662625 PRJNA685060_P_NODE_6724_length_367_cov_1.574830_g6634_i0 PRJNA685060 6724 367 1.57483 5.7796261 root 1 Root_unresolved Root_unresolved 88.6 1.27e-17   NR KAI7956600.1 168172 g6634 i0 40 2.86103542234332 120 70 97.3 2 6 362 332 450 KAI7956600.1 hypothetical protein MJO28_003695 [Puccinia striiformis f. sp. tritici] diamond 1050 89 0.995505617977528 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia striiformis
28787338 28787338 PRJNA685060_P_NODE_14207_length_249_cov_0.875000_g14117_i0 PRJNA685060 14207 249 0.875 2.17875 Trametes polyzona 239206 Fungi Fungi 112 1.24e-26   NR KAI0636032.1 239206 g14117 i0 61 6.69879518072289 82 32 98.8 0 248 3 595 676 KAI0636032.1 exonuclease II [Trametes polyzona] diamond 1668 112 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes polyzona
30019189 30019189 PRJNA685060_P_NODE_12091_length_268_cov_1.056410_g12001_i0 PRJNA685060 12091 268 1.05641 2.8311788 Mycena leptocephala 230808 Fungi Fungi 48.5 4.72e-4   NR KAJ7938234.1 230808 g12001 i0 48.6 0.414179104477612 37 19 41.4 0 124 234 224 260 KAJ7938234.1 DNA cross-link repair protein pso2/snm1 [Mycena leptocephala] diamond 111 48.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena leptocephala
31547734 31547734 PRJNA685060_P_NODE_15716_length_245_cov_1.011628_g15626_i0 PRJNA685060 15716 245 1.011628 2.4784886 Fungi 4751 Fungi Fungi 49.3 1.85e-4   NR KAF7302313.1 658473 g15626 i0 52 1.2734693877551 50 24 61.2 0 94 243 8 57 KAF7302313.1 Carboxylic ester hydrolase [Mycena chlorophos] diamond 312 49.7 0.991951710261569 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena chlorophos
31725635 31725635 PRJNA685060_P_NODE_14257_length_249_cov_0.875000_g14167_i0 PRJNA685060 14257 249 0.875 2.17875 Rhizoctonia solani 456999 Fungi Fungi 167 1.05e-50   NR CAE6486386.1 456999 g14167 i0 93.9 4 82 5 98.8 0 248 3 8 89 CAE6486386.1 unnamed protein product, partial [Rhizoctonia solani] diamond 996 167 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;