RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA683902" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683902 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28546783 28546783 PRJNA683902_S_NODE_36787_length_157_cov_2.900000_g36343_i0 PRJNA683902 36787 157 2.9 4.553 Bacteria 2 Bacteria Bacteria 46.2 7.05e-4   NR MCH8048210.1 2026780 g36343 i0 50 1.8343949044586 48 24 91.7 0 157 14 705 752 MCH8048210.1 tandem-95 repeat protein [Planctomycetota bacterium] diamond 288 46.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28755907 28755907 PRJNA683902_S_NODE_12687_length_358_cov_2.875389_g12243_i0 PRJNA683902 12687 358 2.875389 10.29389262 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 100 8.77e-22   NR MEN6459570.1 2691551 g12243 i0 61.5 0.653631284916201 78 30 65.4 0 356 123 352 429 MEN6459570.1 hypothetical protein [Thermoguttaceae bacterium] diamond 234 100 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;