RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA683902" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683902 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28408668 28408668 PRJNA683902_S_NODE_24106_length_208_cov_2.087719_g23662_i0 PRJNA683902 24106 208 2.087719 4.34245552 Nematocida major 1912982 Fungi Fungi 48.5 1.97e-4   NR XP_047771004.1 1912982 g23662 i0 37.7 0.995192307692308 69 40 99.5 1 207 1 14 79 XP_047771004.1 large subunit ribosomal protein LP0 [Nematocida major] diamond 207 48.5 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida major
31694034 31694034 PRJNA683902_S_NODE_24957_length_203_cov_2.102410_g24513_i0 PRJNA683902 24957 203 2.10241 4.2678923 Nematocida parisii 586133 Fungi Fungi 62.4 2.38e-9   NR KAI5159699.1 586133 g24513 i0 58.7 0.931034482758621 63 26 93.1 0 9 197 216 278 KAI5159699.1 hypothetical protein NEPAR05_2515, partial [Nematocida parisii] diamond 189 62.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida parisii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;