RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA683902" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA683902 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1941300 1941300 PRJNA683902_S_NODE_28842_length_183_cov_2.054795_g28398_i0 PRJNA683902 28842 183 2.054795 3.76027485 Narnaviridae sp. 2583949 Viruses Viruses 106 2.47e-25   NR URG17005.1 2583949 g28398 i0 85.2 1 61 9 100 0 183 1 308 368 URG17005.1 MAG: RNA dependent RNA polymerase, partial [Narnaviridae sp.] diamond 183 106 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.
28882134 28882134 PRJNA683902_S_NODE_10428_length_439_cov_2.587065_g9987_i0 PRJNA683902 10428 439 2.587065 11.35721535 Erysiphe necator associated narnavirus 48 2736405 Viruses Viruses 159 7.259999999999998e-42   NR QJT93780.1 2736405 g9987 i0 60.2 1.74259681093394 128 50 87.5 1 3 386 883 1009 QJT93780.1 RNA-dependent RNA polymerase [Erysiphe necator associated narnavirus 48] diamond 765 159 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Erysiphe necator associated narnavirus 48
29525441 29525441 PRJNA683902_S_NODE_32190_length_171_cov_1.029851_g31746_i0 PRJNA683902 32190 171 1.029851 1.76104521 Narnavirus 186767 Viruses Viruses 78.6 3.4e-15   NR WRK14128.1 3111966 g31746 i0 70.2 2 57 17 100 0 171 1 701 757 WRK14128.1 RNA-dependent RNA polymerase [Nigrospora sphaerica narnavirus 1] diamond 342 79.3 0.991172761664565 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Nigrospora sphaerica narnavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;