contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA683902" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22342513 | 22342513 | PRJNA683902_S_NODE_18358_length_256_cov_1.771689_g17914_i0 | PRJNA683902 | 18358 | 256 | 1.771689 | 4.53552384 | Bacteria | 2 | Bacteria | Bacteria | 92.4 | 1.28e-20 | NR | WP_115310898.1 | 103891 | g17914 | i0 | 48.8 | 2.91796875 | 82 | 42 | 96.1 | 0 | 256 | 11 | 35 | 116 | WP_115310898.1 glycosyltransferase family 2 protein [Veillonella criceti] | diamond | 747 | 93.2 | 0.991416309012876 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella criceti | ||
| 26607179 | 26607179 | PRJNA683902_S_NODE_31541_length_173_cov_1.661765_g31097_i0 | PRJNA683902 | 31541 | 173 | 1.661765 | 2.87485345 | Lachnospiraceae bacterium RM5 | 1200721 | Bacteria | Bacteria | 42 | 0.0273 | NR | SEQ39217.1 | 1200721 | g31097 | i0 | 35.2 | 0.936416184971098 | 54 | 29 | 83.2 | 1 | 154 | 11 | 402 | 455 | SEQ39217.1 putative efflux protein, MATE family [Lachnospiraceae bacterium RM5] | diamond | 162 | 42 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium RM5 | |||
| 27271824 | 27271824 | PRJNA683902_S_NODE_27803_length_188_cov_1.536424_g27359_i0 | PRJNA683902 | 27803 | 188 | 1.536424 | 2.88847712 | Exiguobacterium sp. S22-S28 | 3342768 | Bacteria | Bacteria | 89.4 | 6.360000000000001e-21 | NR | WP_393966238.1 | 3342768 | g27359 | i0 | 59 | 5.8563829787234 | 61 | 25 | 97.3 | 0 | 4 | 186 | 13 | 73 | WP_393966238.1 DUF1801 domain-containing protein [Exiguobacterium sp. S22-S28] | diamond | 1101 | 89.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium sp. S22-S28 | |||
| 27504772 | 27504772 | PRJNA683902_S_NODE_34323_length_164_cov_1.228346_g33879_i0 | PRJNA683902 | 34323 | 164 | 1.228346 | 2.01448744 | Bacteria | 2 | Bacteria | Bacteria | 106 | 6.22e-28 | NR | KZK52508.1 | 1359 | g33879 | i0 | 100 | 2.96341463414634 | 54 | 0 | 98.8 | 0 | 1 | 162 | 54 | 107 | KZK52508.1 Mobile element protein [Lactococcus cremoris] | diamond | 486 | 106 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus cremoris | ||
| 27587801 | 27587801 | PRJNA683902_S_NODE_12804_length_355_cov_2.270440_g12360_i0 | PRJNA683902 | 12804 | 355 | 2.27044 | 8.060062 | Fredinandcohnia sp. 179-A 1 | 2837515 | Bacteria | Bacteria | 51.2 | 1.36e-4 | NR | WP_412966700.1 | 3235176 | g12360 | i0 | 58.5 | 0.346478873239437 | 41 | 17 | 34.6 | 0 | 2 | 124 | 83 | 123 | WP_412966700.1 leucine-rich repeat domain-containing protein [Fredinandcohnia sp. 179-A 10B2 NHS] | diamond | 123 | 51.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Fredinandcohnia | Fredinandcohnia sp. 179-A 10B2 NHS | ||
| 30461772 | 30461772 | PRJNA683902_S_NODE_33833_length_165_cov_2.382812_g33389_i0 | PRJNA683902 | 33833 | 165 | 2.382812 | 3.9316398 | Clostridiaceae bacterium | 1898204 | Bacteria | Bacteria | 42 | 0.00616 | NR | NLL65181.1 | 1898204 | g33389 | i0 | 65.5 | 0.527272727272727 | 29 | 10 | 52.7 | 0 | 77 | 163 | 1 | 29 | NLL65181.1 riboflavin biosynthesis protein RibD [Clostridiaceae bacterium] | diamond | 87 | 42 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridiaceae bacterium | |||
| 30599173 | 30599173 | PRJNA683902_S_NODE_29853_length_179_cov_1.612676_g29409_i0 | PRJNA683902 | 29853 | 179 | 1.612676 | 2.88669004 | Bacteria | 2 | Bacteria | Bacteria | 54.3 | 1.23e-6 | NR | WP_102712320.1 | 474957 | g29409 | i0 | 71.4 | 1.6927374301676 | 35 | 10 | 58.7 | 0 | 1 | 105 | 259 | 293 | WP_102712320.1 methionyl-tRNA formyltransferase [Paenibacillus castaneae] | diamond | 303 | 54.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus castaneae | ||
| 30757318 | 30757318 | PRJNA683902_S_NODE_24834_length_204_cov_1.401198_g24390_i0 | PRJNA683902 | 24834 | 204 | 1.401198 | 2.85844392 | Bacillati | 1783272 | Bacteria | Bacteria | 90.5 | 4.71e-21 | NR | WP_275532484.1 | 1965578 | g24390 | i0 | 60 | 1.89705882352941 | 65 | 26 | 95.6 | 0 | 200 | 6 | 86 | 150 | WP_275532484.1 pyroglutamyl-peptidase I [Pseudoflavonifractor sp. An187] | diamond | 387 | 91.3 | 0.991237677984666 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Pseudoflavonifractor | Pseudoflavonifractor sp. An187 | ||
| 32548567 | 32548567 | PRJNA683902_S_NODE_18979_length_249_cov_1.830189_g18535_i0 | PRJNA683902 | 18979 | 249 | 1.830189 | 4.55717061 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 42.7 | 0.0166 | NR | MBQ7327491.1 | 2044939 | g18535 | i0 | 38.3 | 0.72289156626506 | 60 | 33 | 72.3 | 2 | 224 | 45 | 9 | 64 | MBQ7327491.1 30S ribosomal protein S11 [Clostridia bacterium] | diamond | 180 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 32705722 | 32705722 | PRJNA683902_S_NODE_34540_length_163_cov_2.166667_g34096_i0 | PRJNA683902 | 34540 | 163 | 2.166667 | 3.53166721 | Neobacillus cucumis | 1740721 | Bacteria | Bacteria | 99.4 | 1.72e-24 | NR | MFC4290748.1 | 1740721 | g34096 | i0 | 100 | 0.993865030674847 | 54 | 0 | 99.4 | 0 | 162 | 1 | 20 | 73 | MFC4290748.1 hypothetical protein [Neobacillus cucumis] | diamond | 162 | 99.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Neobacillus | Neobacillus cucumis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;