RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA683669" and tax_phylum = "Onychophora"

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tax_superkingdom 1

tax_phylum 1

  • Onychophora · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683669 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27335195 27335195 PRJNA683669_P_NODE_31103_length_245_cov_0.895349_g30871_i0 PRJNA683669 31103 245 0.895349 2.19360505 Principapillatus hitoyensis 1281314 Onychophora other_Eukaryota 67.4 5.7e-11   NR WMM48044.1 1281314 g30871 i0 71.7 1.68979591836735 46 13 56.3 0 1 138 272 317 WMM48044.1 phosphoenolpyruvate mutase [Principapillatus hitoyensis] diamond 414 67.4 1 Eukaryota Opisthokonta Metazoa Onychophora Udeonychophora Euonychophora Peripatidae Principapillatus Principapillatus hitoyensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;