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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA683669" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA683669 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1174854 1174854 PRJNA683669_P_NODE_19501_length_292_cov_1.054795_g19269_i0 PRJNA683669 19501 292 1.054795 3.0800014 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 63.2 4.2e-9   NR MCL1880786.1 2485925 g19269 i0 58.3 0.616438356164384 60 19 61.6 2 290 111 292 345 MCL1880786.1 glutamine-hydrolyzing GMP synthase [Oscillospiraceae bacterium] diamond 180 63.2 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
18517011 18517011 PRJNA683669_P_NODE_19795_length_290_cov_1.059908_g19563_i0 PRJNA683669 19795 290 1.059908 3.0737332 root 1 Root_unresolved Root_unresolved 154 2.9e-41   NR WP_092593252.1 65403 g19563 i0 80.2 123.724137931034 96 19 99.3 0 2 289 566 661 WP_092593252.1 ATP-dependent chaperone ClpB [Acidaminobacter hydrogenoformans] diamond 35880 155 0.993548387096774 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Acidaminobacteraceae Acidaminobacter Acidaminobacter hydrogenoformans
23617770 23617770 PRJNA683669_P_NODE_139_length_2508_cov_10.299795_g115_i0 PRJNA683669 139 2508 10.299795 258.3188586 root 1 Root_unresolved Root_unresolved 978 0   NR WP_103896174.1 29344 g115 i0 66.5 74.3205741626794 728 238 87.1 4 2307 124 18 739 WP_103896174.1 formate C-acetyltransferase [Caloramator fervidus] diamond 186396 978 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Caloramator Caloramator fervidus
24891196 24891196 PRJNA683669_P_NODE_5640_length_542_cov_1.756930_g5412_i0 PRJNA683669 5640 542 1.75693 9.5225606 Bacillaceae 186817 Bacteria Bacteria 132 5.83e-34   NR WP_094913296.1 186817 g5412 i0 45.9 1.92066420664207 181 81 99.1 6 6 542 2 167 WP_094913296.1 MULTISPECIES: NADP-dependent oxidoreductase [Bacillaceae] diamond 1041 132 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae    
27144956 27144956 PRJNA683669_P_NODE_21902_length_277_cov_1.166667_g21670_i0 PRJNA683669 21902 277 1.166667 3.23166759 Clostridia bacterium 2044939 Bacteria Bacteria 45.4 0.00622   NR MBQ7035414.1 2044939 g21670 i0 41.7 0.51985559566787 48 24 47.7 1 91 222 432 479 MBQ7035414.1 oligosaccharide flippase family protein [Clostridia bacterium] diamond 144 45.4 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
27492994 27492994 PRJNA683669_P_NODE_15803_length_326_cov_1.505929_g15572_i0 PRJNA683669 15803 326 1.505929 4.90932854 Lachnospiraceae bacterium 1898203 Bacteria Bacteria 66.6 4.14e-10   NR MDD7267009.1 1898203 g15572 i0 41.8 0.901840490797546 98 51 87.4 3 6 290 191 285 MDD7267009.1 VWA domain-containing protein [Lachnospiraceae bacterium] diamond 294 66.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
27587794 27587794 PRJNA683669_P_NODE_6124_length_518_cov_2.635955_g5894_i0 PRJNA683669 6124 518 2.635955 13.6542469 Ruminococcaceae bacterium OttesenSCG-928-A16 2885180 Bacteria Bacteria 62 1.11e-7   NR MDL2323811.1 2885180 g5894 i0 39 0.474903474903475 82 44 44 1 298 71 415 496 MDL2323811.1 trypsin-like peptidase domain-containing protein [Ruminococcaceae bacterium OttesenSCG-928-A16] diamond 246 62 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Ruminococcaceae bacterium OttesenSCG-928-A16
27587798 27587798 PRJNA683669_P_NODE_9524_length_414_cov_6.926686_g9293_i0 PRJNA683669 9524 414 6.926686 28.67648004 Neobacillus cucumis 1740721 Bacteria Bacteria 150 3.53e-44   NR WP_378575789.1 1740721 g9293 i0 74.4 0.847826086956522 117 25 84.8 1 18 368 10 121 WP_378575789.1 HU family DNA-binding protein, partial [Neobacillus cucumis] diamond 351 150 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Neobacillus Neobacillus cucumis
27978127 27978127 PRJNA683669_P_NODE_16885_length_315_cov_1.590909_g16654_i0 PRJNA683669 16885 315 1.590909 5.01136335 PVC group 1783257 Bacteria Bacteria 103 3.46e-23   NR MCL6591772.1 1879010 g16654 i0 57.7 4.51428571428571 78 32 73.3 1 306 76 467 544 MCL6591772.1 FAD-dependent oxidoreductase [Bacillota bacterium] diamond 1422 103 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
28471887 28471887 PRJNA683669_P_NODE_6306_length_510_cov_2.032037_g6076_i0 PRJNA683669 6306 510 2.032037 10.3633887 Tissierellia bacterium 2049431 Bacteria Bacteria 55.8 3.83e-6   NR NLJ99194.1 2049431 g6076 i0 43.9 0.388235294117647 66 35 37.6 1 416 225 67 132 NLJ99194.1 LysM peptidoglycan-binding domain-containing protein [Tissierellia bacterium] diamond 198 55.8 1 Bacteria   Bacillati Bacillota Tissierellia       Tissierellia bacterium
28514996 28514996 PRJNA683669_P_NODE_30747_length_245_cov_0.895349_g30515_i0 PRJNA683669 30747 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 111 2.0900000000000003e-27   NR MBQ9940031.1 2044939 g30515 i0 66.3 4.92244897959184 80 27 98 0 2 241 55 134 MBQ9940031.1 type I glyceraldehyde-3-phosphate dehydrogenase [Clostridia bacterium] diamond 1206 112 0.991071428571429 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
28609692 28609692 PRJNA683669_P_NODE_5547_length_547_cov_1.489451_g5319_i0 PRJNA683669 5547 547 1.489451 8.14729697 Bacillaceae 186817 Bacteria Bacteria 146 8.769999999999999e-37   NR WP_035178644.1 246272 g5319 i0 43.1 4.11334552102377 188 97 99.8 5 547 2 1829 2012 WP_035178644.1 type I polyketide synthase [Alkalihalobacterium bogoriense] diamond 2250 147 0.993197278911565 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Alkalihalobacterium Alkalihalobacterium bogoriense
29209677 29209677 PRJNA683669_P_NODE_14849_length_336_cov_1.756654_g14618_i0 PRJNA683669 14849 336 1.756654 5.90235744 Bacillati 1783272 Bacteria Bacteria 45.1 0.0173   NR WP_031576509.1 1318 g14618 i0 43.5 3.41071428571429 62 26 55.4 1 130 315 238 290 WP_031576509.1 AAA family ATPase [Streptococcus parasanguinis] diamond 1146 45.1 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus parasanguinis
29639702 29639702 PRJNA683669_P_NODE_33450_length_242_cov_0.911243_g33218_i0 PRJNA683669 33450 242 0.911243 2.20520806 Neobacillus cucumis 1740721 Bacteria Bacteria 77.8 2.82e-16   NR WP_378575789.1 1740721 g33218 i0 81.3 1.1900826446281 48 9 59.5 0 240 97 74 121 WP_378575789.1 HU family DNA-binding protein, partial [Neobacillus cucumis] diamond 288 77.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Neobacillus Neobacillus cucumis
30062035 30062035 PRJNA683669_P_NODE_22111_length_276_cov_1.123153_g21879_i0 PRJNA683669 22111 276 1.123153 3.09990228 PVC group 1783257 Bacteria Bacteria 102 2.25e-24   NR MBR1989332.1 1879010 g21879 i0 57.8 4.89130434782609 90 34 97.8 2 3 272 25 110 MBR1989332.1 pyridoxal-phosphate dependent enzyme [Bacillota bacterium] diamond 1350 102 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
30378535 30378535 PRJNA683669_P_NODE_21032_length_282_cov_1.377990_g20800_i0 PRJNA683669 21032 282 1.37799 3.8859318 Bacteria 2 Bacteria Bacteria 114 6.56e-28   NR WP_109304644.1 202750 g20800 i0 58.1 11.7659574468085 93 39 98.9 0 2 280 282 374 WP_109304644.1 acyl-CoA dehydrogenase family protein [Kurthia sibirica] diamond 3318 115 0.991304347826087 Bacteria   Bacillati Bacillota Bacilli Bacillales Caryophanaceae Kurthia Kurthia sibirica
30682278 30682278 PRJNA683669_P_NODE_32493_length_243_cov_0.905882_g32261_i0 PRJNA683669 32493 243 0.905882 2.20129326 Clostridiales bacterium 1898207 Bacteria Bacteria 55.8 8.51e-7   NR HHU73625.1 1898207 g32261 i0 36.4 2.80246913580247 77 46 95.1 1 232 2 71 144 HHU73625.1 hypothetical protein [Clostridiales bacterium] diamond 681 55.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
30714021 30714021 PRJNA683669_P_NODE_27894_length_249_cov_0.875000_g27662_i0 PRJNA683669 27894 249 0.875 2.17875 Faecalibacterium prausnitzii 853 Bacteria Bacteria 59.3 2.35e-8   NR WP_256175240.1 853 g27662 i0 76.5 0.831325301204819 34 8 41 0 10 111 1 34 WP_256175240.1 tetratricopeptide repeat protein, partial [Faecalibacterium prausnitzii] diamond 207 59.3 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Faecalibacterium Faecalibacterium prausnitzii
30777319 30777319 PRJNA683669_P_NODE_1874_length_947_cov_1.810069_g1704_i0 PRJNA683669 1874 947 1.810069 17.14135343 Clostridia bacterium 2044939 Bacteria Bacteria 63.9 3.67e-7   NR MBR3674108.1 2044939 g1704 i0 34.7 0.300950369588173 95 60 30.1 1 679 395 626 718 MBR3674108.1 hypothetical protein [Clostridia bacterium] diamond 285 63.9 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
30998480 30998480 PRJNA683669_P_NODE_21714_length_278_cov_1.258537_g21482_i0 PRJNA683669 21714 278 1.258537 3.49873286 Bacillus cereus group 86661 Bacteria Bacteria 45.8 0.00382   NR WP_098562749.1 86661 g21482 i0 30.9 1.74820143884892 81 51 87.4 3 277 35 140 215 WP_098562749.1 MULTISPECIES: thioesterase II family protein [Bacillus cereus group] diamond 486 45.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus  
31061894 31061894 PRJNA683669_P_NODE_31275_length_245_cov_0.895349_g31043_i0 PRJNA683669 31275 245 0.895349 2.19360505 Clostridia bacterium 2044939 Bacteria Bacteria 43.5 0.021   NR MDE5765766.1 2044939 g31043 i0 41.8 0.673469387755102 55 32 67.3 0 24 188 649 703 MDE5765766.1 hypothetical protein [Clostridia bacterium] diamond 165 43.5 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
31093203 31093203 PRJNA683669_P_NODE_14415_length_341_cov_1.518657_g14184_i0 PRJNA683669 14415 341 1.518657 5.17862037 Solobacterium sp. 2060878 Bacteria Bacteria 42.7 0.0167   NR MBF1113994.1 2060878 g14184 i0 45 0.351906158357771 40 22 35.2 0 221 340 4 43 MBF1113994.1 ATP-binding cassette domain-containing protein [Solobacterium sp.] diamond 120 42.7 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Solobacterium Solobacterium sp.
31199178 31199178 PRJNA683669_P_NODE_12475_length_366_cov_1.436860_g12244_i0 PRJNA683669 12475 366 1.43686 5.2589076 Bacillaceae 186817 Bacteria Bacteria 152 1.01e-43   NR WP_042345812.1 1243664 g12244 i0 65.5 6.18852459016393 110 38 90.2 0 33 362 2 111 WP_042345812.1 deoxyribose-phosphate aldolase [Bacillus massiliigorillae] diamond 2265 152 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus massiliigorillae
31421024 31421024 PRJNA683669_P_NODE_18036_length_305_cov_0.995690_g17804_i0 PRJNA683669 18036 305 0.99569 3.0368545 root 1 Root_unresolved Root_unresolved 53.5 4.66e-6   NR WP_010329842.1 72361 g17804 i0 51.1 2.88196721311475 47 23 46.2 0 158 298 122 168 WP_010329842.1 AP2 domain-containing protein [Bacillus vallismortis] diamond 879 53.9 0.992578849721707 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus vallismortis
31630747 31630747 PRJNA683669_P_NODE_4496_length_614_cov_2.277264_g4272_i0 PRJNA683669 4496 614 2.277264 13.98240096 Neobacillus cucumis 1740721 Bacteria Bacteria 127 1.98e-33   NR WP_378575637.1 1740721 g4272 i0 61.8 0.742671009771987 152 37 71.3 5 569 132 10 146 WP_378575637.1 hypothetical protein, partial [Neobacillus cucumis] diamond 456 127 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Neobacillus Neobacillus cucumis
31662249 31662249 PRJNA683669_P_NODE_19417_length_293_cov_0.863636_g19185_i0 PRJNA683669 19417 293 0.863636 2.53045348 Neobacillus cucumis 1740721 Bacteria Bacteria 112 1.75e-29   NR WP_378575637.1 1740721 g19185 i0 77.4 0.860068259385666 84 19 86 0 4 255 63 146 WP_378575637.1 hypothetical protein, partial [Neobacillus cucumis] diamond 252 112 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Neobacillus Neobacillus cucumis
31788724 31788724 PRJNA683669_P_NODE_26257_length_251_cov_0.865169_g26025_i0 PRJNA683669 26257 251 0.865169 2.17157419 Robertmurraya sp. DFI.2.37 3031819 Bacteria Bacteria 47 0.00093000000000000005   NR WP_150949009.1 3031819 g26025 i0 51 0.585657370517928 49 24 58.6 0 73 219 4 52 WP_150949009.1 HAD family hydrolase [Robertmurraya sp. DFI.2.37] diamond 147 47 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Robertmurraya Robertmurraya sp. DFI.2.37
31820455 31820455 PRJNA683669_P_NODE_4817_length_592_cov_1.329480_g4592_i0 PRJNA683669 4817 592 1.32948 7.8705216 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 57 1.8e-6   NR MCI9456121.1 2485925 g4592 i0 29.5 0.841216216216216 166 98 83.6 8 82 576 2 149 MCI9456121.1 hypothetical protein [Oscillospiraceae bacterium] diamond 498 57 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
32232152 32232152 PRJNA683669_P_NODE_28658_length_248_cov_0.880000_g28426_i0 PRJNA683669 28658 248 0.88 2.1824 Eubacteriales bacterium 2831996 Bacteria Bacteria 55.5 1.27e-6   NR MDD4772073.1 2831996 g28426 i0 40.3 3.19354838709677 72 42 87.1 1 29 244 216 286 MDD4772073.1 ROK family protein [Eubacteriales bacterium] diamond 792 55.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Eubacteriales bacterium
32327215 32327215 PRJNA683669_P_NODE_30859_length_245_cov_0.895349_g30627_i0 PRJNA683669 30859 245 0.895349 2.19360505 Kyrpidia spormannii 2055160 Bacteria Bacteria 56.2 6.35e-7   NR WP_170086207.1 2055160 g30627 i0 36.5 2.75510204081633 74 44 86.9 2 233 21 98 171 WP_170086207.1 phosphate ABC transporter substrate-binding protein PstS [Kyrpidia spormannii] diamond 675 56.2 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Alicyclobacillaceae Kyrpidia Kyrpidia spormannii
32737506 32737506 PRJNA683669_P_NODE_6620_length_497_cov_1.452830_g6389_i0 PRJNA683669 6620 497 1.45283 7.2205651 Syntrophomonadaceae bacterium 2093811 Bacteria Bacteria 54.7 3.32e-5   NR MEA4925381.1 2093811 g6389 i0 38.1 1.09255533199195 84 51 50.7 1 154 405 532 614 MEA4925381.1 polyribonucleotide nucleotidyltransferase [Syntrophomonadaceae bacterium] diamond 543 54.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Syntrophomonadaceae   Syntrophomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;