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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA683669" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

bioproject 1

  • PRJNA683669 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12144450 12144450 PRJNA683669_P_NODE_4710_length_599_cov_1.325095_g4485_i0 PRJNA683669 4710 599 1.325095 7.93731905 Thermoproteota archaeon 2056631 Archaea Archaea 276 3.44e-84   NR MFC1755240.1 2056631 g4485 i0 66.7 4.95826377295492 201 63 99.7 2 2 598 487 685 MFC1755240.1 pyruvate, phosphate dikinase [Thermoproteota archaeon] diamond 2970 276 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
27113582 27113582 PRJNA683669_P_NODE_33342_length_242_cov_0.911243_g33110_i0 PRJNA683669 33342 242 0.911243 2.20520806 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 71.2 4.7e-13   NR HXE73341.1 2507556 g33110 i0 51.3 2.02066115702479 80 37 96.7 2 238 5 65 144 HXE73341.1 methyltransferase domain-containing protein [Candidatus Nitrosotenuis sp.] diamond 489 71.2 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
32705673 32705673 PRJNA683669_P_NODE_12580_length_365_cov_0.921233_g12349_i0 PRJNA683669 12580 365 0.921233 3.36250045 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 154 4.68e-43   NR MEM1515653.1 3045160 g12349 i0 60 3.94520547945205 120 48 98.6 0 1 360 69 188 MEM1515653.1 glyoxylate reductase [Candidatus Bathyarchaeia archaeon] diamond 1440 154 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
32863199 32863199 PRJNA683669_P_NODE_12200_length_370_cov_1.488215_g11969_i0 PRJNA683669 12200 370 1.488215 5.5063955 Nitrososphaera sp. 1971748 Archaea Archaea 76.3 8.66e-15   NR MER3407808.1 1971748 g11969 i0 44 0.940540540540541 116 49 92.4 3 344 3 4 105 MER3407808.1 short-chain dehydrogenase/reductase [Nitrososphaera sp.] diamond 348 76.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;