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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA682774" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA682774 · 21 ✖

analysis 1

  • diamond · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3215416 3215416 PRJNA682774_P_NODE_1003_length_432_cov_1.086351_g974_i0 PRJNA682774 1003 432 1.086351 4.69303632 Eukaryota 2759 Plants Plants 151 2.74e-43   NR KAG2491764.1 47281 g974 i0 66.4 8.29861111111111 119 39 82.6 1 2 358 75 192 KAG2491764.1 hypothetical protein HYH03_009925 [Edaphochlamys debaryana] diamond 3585 152 0.993421052631579 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
5768322 5768322 PRJNA682774_P_NODE_865_length_463_cov_1.397436_g836_i0 PRJNA682774 865 463 1.397436 6.47012868 Chloropicon primus 1764295 Plants Plants 200 7.43e-61   NR QDZ22777.1 1764295 g836 i0 59.5 0.958963282937365 148 57 94 2 463 29 172 319 QDZ22777.1 cathepsin B cysteine protease [Chloropicon primus] diamond 444 200 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon primus
8317787 8317787 PRJNA682774_P_NODE_1767_length_335_cov_2.381679_g1738_i0 PRJNA682774 1767 335 2.381679 7.97862465 Scenedesmus sp. PABB 2909984 Plants Plants 82.4 1.33e-15   NR KAF8054880.1 2742167 g1738 i0 51.9 1.86268656716418 104 47 93.1 2 24 335 1 101 KAF8054880.1 ARSA1 [Scenedesmus sp. PABB004] diamond 624 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
8317817 8317817 PRJNA682774_P_NODE_4227_length_248_cov_2.142857_g4198_i0 PRJNA682774 4227 248 2.142857 5.31428536 Chlamydomonadales 3042 Plants Plants 148 3.41e-39   NR XP_001691785.2 3055 g4198 i0 84.1 8.89112903225806 82 13 99.2 0 247 2 235 316 XP_001691785.2 uncharacterized protein CHLRE_17g699100v5 [Chlamydomonas reinhardtii] diamond 2205 149 0.993288590604027 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17752540 17752540 PRJNA682774_P_NODE_2514_length_289_cov_1.407407_g2485_i0 PRJNA682774 2514 289 1.407407 4.06740623 Micromonas pusilla CCMP1545 564608 Plants Plants 82.4 1.46e-17   NR XP_003058268.1 564608 g2485 i0 81.8 6.7681660899654 55 10 57.1 0 289 125 89 143 XP_003058268.1 H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily [Micromonas pusilla CCMP1545] diamond 1956 82.4 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas pusilla
24126671 24126671 PRJNA682774_P_NODE_1339_length_377_cov_0.921053_g1310_i0 PRJNA682774 1339 377 0.921053 3.47236981 Chlamydomonadales 3042 Plants Plants 140 1.22e-39   NR KAF5836517.1 3046 g1310 i0 80.2 3.68435013262599 116 23 92.3 0 30 377 1 116 KAF5836517.1 ribosomal protein S27a component of cytosolic 80S ribosome and 40S small subunit [Dunaliella salina] diamond 1389 140 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
27303530 27303530 PRJNA682774_P_NODE_4723_length_246_cov_0.901734_g4694_i0 PRJNA682774 4723 246 0.901734 2.21826564 Trebouxia sp. C 2796353 Plants Plants 55.5 1.29e-6   NR KAL0048818.1 2905655 g4694 i0 35.7 2.5609756097561 70 45 85.4 0 211 2 1719 1788 KAL0048818.1 hypothetical protein WJX82_011724 [Trebouxia sp. C0006] diamond 630 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006
27315185 27315185 PRJNA682774_P_NODE_3963_length_250_cov_0.881356_g3934_i0 PRJNA682774 3963 250 0.881356 2.20339 Eukaryota 2759 Plants Plants 52.4 1.66e-5   NR KAK9908934.1 248742 g3934 i0 40.5 2.964 74 32 88.8 1 234 13 314 375 KAK9908934.1 hypothetical protein WJX75_004938 [Coccomyxa subellipsoidea] diamond 741 52.8 0.992424242424242 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27694299 27694299 PRJNA682774_P_NODE_4804_length_245_cov_0.906977_g4775_i0 PRJNA682774 4804 245 0.906977 2.22209365 Chlamydomonadales 3042 Plants Plants 110 1.63e-29   NR XP_042927436.1 3055 g4775 i0 88.7 2.27755102040816 62 7 75.9 0 189 4 1 62 XP_042927436.1 uncharacterized protein CHLRE_02g105950v5 [Chlamydomonas reinhardtii] diamond 558 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
28061168 28061168 PRJNA682774_P_NODE_5205_length_243_cov_0.917647_g5176_i0 PRJNA682774 5205 243 0.917647 2.22988221 Micromonas commoda 296587 Plants Plants 135 4.52e-38   NR XP_002508406.1 296587 g5176 i0 76.3 1.97530864197531 80 19 98.8 0 242 3 30 109 XP_002508406.1 peptidyl-prolyl cis-trans isomerase [Micromonas commoda] diamond 480 135 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
28136200 28136200 PRJNA682774_P_NODE_245_length_872_cov_8.782228_g220_i0 PRJNA682774 245 872 8.782228 76.58102816 Chlamydomonas 3052 Plants Plants 58.2 1.48e-5   NR KAG2423999.1 51695 g220 i0 39.2 1.32110091743119 125 62 42.3 5 818 450 6 118 KAG2423999.1 hypothetical protein HXX76_014825 [Chlamydomonas incerta] diamond 1152 58.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
28218884 28218884 PRJNA682774_P_NODE_3686_length_252_cov_0.871508_g3657_i0 PRJNA682774 3686 252 0.871508 2.19620016 Pycnococcus provasolii 41880 Plants Plants 99.4 4.63e-22   NR GHP10865.1 41880 g3657 i0 54.3 1.86904761904762 81 37 96.4 0 248 6 335 415 GHP10865.1 hypothetical protein PPROV_000959600 [Pycnococcus provasolii] diamond 471 99.4 1 Eukaryota   Viridiplantae Chlorophyta Pseudoscourfieldiophyceae Pseudoscourfieldiales Pycnococcaceae Pycnococcus Pycnococcus provasolii
29967473 29967473 PRJNA682774_P_NODE_2831_length_276_cov_1.000000_g2802_i0 PRJNA682774 2831 276 1 2.76 Opisthokonta 33154 Plants Plants 61.6 1.03e-9   NR GHP06741.1 41880 g2802 i0 83.8 2.01086956521739 37 6 40.2 0 275 165 90 126 GHP06741.1 RNA binding protein snu13 [Pycnococcus provasolii] diamond 555 61.6 1 Eukaryota   Viridiplantae Chlorophyta Pseudoscourfieldiophyceae Pseudoscourfieldiales Pycnococcaceae Pycnococcus Pycnococcus provasolii
30113650 30113650 PRJNA682774_P_NODE_3332_length_255_cov_1.714286_g3303_i0 PRJNA682774 3332 255 1.714286 4.3714293 Chlorella sorokiniana 3076 Plants Plants 128 1.01e-33   NR PRW33552.1 3076 g3303 i0 67.8 2.05882352941176 90 23 98.8 1 255 4 226 315 PRW33552.1 Fructose-1,6- cytosolic [Chlorella sorokiniana] diamond 525 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30156711 30156711 PRJNA682774_P_NODE_4712_length_246_cov_0.901734_g4683_i0 PRJNA682774 4712 246 0.901734 2.21826564 root 1 Root_unresolved Root_unresolved 52.8 1.2e-5   NR KAI3437560.1 3077 g4683 i0 37 5.5609756097561 81 46 96.3 3 237 1 609 686 KAI3437560.1 hypothetical protein D9Q98_000013 [Chlorella vulgaris] diamond 1368 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
31472774 31472774 PRJNA682774_P_NODE_3856_length_251_cov_0.876404_g3827_i0 PRJNA682774 3856 251 0.876404 2.19977404 Scenedesmus sp. PABB 2909984 Plants Plants 125 5.05e-32   NR KAF8063068.1 2742167 g3827 i0 73.5 1.9840637450199201 83 22 99.2 0 2 250 327 409 KAF8063068.1 hslO [Scenedesmus sp. PABB004] diamond 498 125 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
31630718 31630718 PRJNA682774_P_NODE_2976_length_269_cov_1.561224_g2947_i0 PRJNA682774 2976 269 1.561224 4.19969256 Chloropicon roscoffensis 1461544 Plants Plants 58.5 1.25e-7   NR WZN61819.1 1461544 g2947 i0 37.1 3.08921933085502 89 46 89.2 4 29 268 32 119 WZN61819.1 cathepsin B cysteine protease [Chloropicon roscoffensis] diamond 831 58.5 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon roscoffensis
31705658 31705658 PRJNA682774_P_NODE_5517_length_235_cov_3.080247_g5488_i0 PRJNA682774 5517 235 3.080247 7.23858045 Chlamydomonadales 3042 Plants Plants 105 3.0400000000000004e-27   NR GIL66009.1 51714 g5488 i0 78.5 1.6595744680851101 65 14 83 0 39 233 1 65 GIL66009.1 hypothetical protein Vafri_19640, partial [Volvox africanus] diamond 390 106 0.990566037735849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
32327177 32327177 PRJNA682774_P_NODE_2979_length_269_cov_1.367347_g2950_i0 PRJNA682774 2979 269 1.367347 3.67816343 Micromonas pusilla CCMP1545 564608 Plants Plants 87 5.92e-18   NR XP_003056593.1 564608 g2950 i0 42.7 1.92936802973978 89 51 99.3 0 268 2 175 263 XP_003056593.1 uncharacterized protein MICPUCDRAFT_65131 [Micromonas pusilla CCMP1545] diamond 519 87 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas pusilla
32831737 32831737 PRJNA682774_P_NODE_2080_length_313_cov_0.829167_g2051_i0 PRJNA682774 2080 313 0.829167 2.59529271 Scenedesmus sp. PABB 2909984 Plants Plants 87.4 1.79e-17   NR KAF8054880.1 2742167 g2051 i0 54 4.62939297124601 100 43 95.8 2 13 312 1 97 KAF8054880.1 ARSA1 [Scenedesmus sp. PABB004] diamond 1449 87.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
32906228 32906228 PRJNA682774_P_NODE_5240_length_243_cov_0.917647_g5211_i0 PRJNA682774 5240 243 0.917647 2.22988221 Chlamydomonadales 3042 Plants Plants 67 1.04e-10   NR KXZ41737.1 33097 g5211 i0 64 4.69135802469136 50 18 61.7 0 241 92 536 585 KXZ41737.1 BBS9 protein [Gonium pectorale] diamond 1140 67 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;