RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA682774" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA682774 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5768303 5768303 PRJNA682774_P_NODE_4485_length_247_cov_0.896552_g4456_i0 PRJNA682774 4485 247 0.896552 2.21448344 Agaricomycetes 155619 Fungi Fungi 143 2.6e-39   NR KAF4564571.1 28995 g4456 i0 88.6 66.2914979757085 70 8 85 0 1 210 245 314 KAF4564571.1 Serine/threonine-protein phosphatase pp1 [Pleurotus pulmonarius] diamond 16374 143 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pleurotaceae Pleurotus Pleurotus pulmonarius
7552618 7552618 PRJNA682774_P_NODE_5346_length_242_cov_0.923077_g5317_i0 PRJNA682774 5346 242 0.923077 2.23384634 Cystobasidium minutum MCA 421 29899 Fungi Fungi 132 2.25e-36   NR XP_066819790.1 1397322 g5317 i0 92.4 0.979338842975207 79 6 97.9 0 242 6 149 227 XP_066819790.1 40S ribosomal protein eS6 [Cystobasidium minutum MCA 4210] diamond 237 132 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium minutum
22341925 22341925 PRJNA682774_P_NODE_2758_length_278_cov_3.024390_g2729_i0 PRJNA682774 2758 278 3.02439 8.4078042 Fungi 4751 Fungi Fungi 139 4.69e-36   NR KAJ8518575.1 34470 g2729 i0 72.8 34.4460431654676 92 25 99.3 0 1 276 745 836 KAJ8518575.1 hypothetical protein ONZ45_g4397 [Pleurotus djamor] diamond 9576 140 0.992857142857143 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pleurotaceae Pleurotus Pleurotus djamor
23617580 23617580 PRJNA682774_P_NODE_839_length_469_cov_2.270202_g810_i0 PRJNA682774 839 469 2.270202 10.64724738 Basidiomycota 5204 Fungi Fungi 229 4.21e-71   NR XP_027483994.1 76775 g810 i0 69.2 79.0746268656716 156 48 99.8 0 468 1 85 240 XP_027483994.1 large subunit ribosomal protein L3e [Malassezia restricta] diamond 37086 229 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
28356935 28356935 PRJNA682774_P_NODE_5546_length_229_cov_2.217949_g5517_i0 PRJNA682774 5546 229 2.217949 5.07910321 Opisthokonta 33154 Fungi Fungi 77.4 9.54e-16   NR KAH7931128.1 85980 g5517 i0 66.2 43.6244541484716 65 21 83.8 1 228 37 99 163 KAH7931128.1 hypothetical protein BV22DRAFT_1115884 [Leucogyrophana mollusca] diamond 9990 77.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales   Leucogyrophana Leucogyrophana mollusca
28882082 28882082 PRJNA682774_P_NODE_3228_length_259_cov_1.634409_g3199_i0 PRJNA682774 3228 259 1.634409 4.23311931 Trametes gibbosa 160864 Fungi Fungi 43.9 0.00959   NR KAI0820000.1 160864 g3199 i0 32.5 0.891891891891892 77 45 81.1 2 19 228 84 160 KAI0820000.1 hypothetical protein BC628DRAFT_944931 [Trametes gibbosa] diamond 231 43.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes gibbosa
29430341 29430341 PRJNA682774_P_NODE_529_length_598_cov_1.893333_g501_i0 PRJNA682774 529 598 1.893333 11.32213134 Fungi 4751 Fungi Fungi 88.6 7.8e-18   NR QRV85434.1 170446 g501 i0 34.1 8.53846153846154 170 92 84.8 3 581 75 49 199 QRV85434.1 eukaryotic translation initiation factor 5A-2 [Ceratobasidium sp. AG-Ba] diamond 5106 88.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Ceratobasidium Ceratobasidium sp. AG-Ba
30303776 30303776 PRJNA682774_P_NODE_2132_length_309_cov_1.822034_g2103_i0 PRJNA682774 2132 309 1.822034 5.63008506 Tulasnella sp. 418 2600226 Fungi Fungi 78.2 6.62e-16   NR KAG8921992.1 2600226 g2103 i0 46.5 0.83495145631068 86 43 80.6 2 59 307 8 93 KAG8921992.1 hypothetical protein FRC02_012218 [Tulasnella sp. 418] diamond 258 78.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Tulasnellaceae Tulasnella Tulasnella sp. 418
30335317 30335317 PRJNA682774_P_NODE_2152_length_308_cov_1.327660_g2123_i0 PRJNA682774 2152 308 1.32766 4.0891928 Leucoagaricus sp. SymC.cos 1714833 Fungi Fungi 42 0.0252   NR KXN81851.1 1714833 g2123 i0 44.9 0.477272727272727 49 23 44.8 2 200 63 35 82 KXN81851.1 hypothetical protein AN958_03620 [Leucoagaricus sp. SymC.cos] diamond 147 42 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Agaricaceae Leucoagaricus Leucoagaricus sp. SymC.cos
30903689 30903689 PRJNA682774_P_NODE_1054_length_420_cov_1.345821_g1025_i0 PRJNA682774 1054 420 1.345821 5.6524482 Kwoniella sp. B9 1941230 Fungi Fungi 164 6.829999999999998e-48   NR WWD00698.1 1423914 g1025 i0 59.2 3.57142857142857 125 50 89.3 1 376 2 10 133 WWD00698.1 hypothetical protein V866_007633 [Kwoniella sp. B9012] diamond 1500 164 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella sp. B9012
31630717 31630717 PRJNA682774_P_NODE_2696_length_281_cov_1.197115_g2667_i0 PRJNA682774 2696 281 1.197115 3.36389315 Schizopora paradoxa 27342 Fungi Fungi 57.8 2.93e-7   NR KLO06524.1 27342 g2667 i0 54.5 3.84341637010676 44 19 47 1 147 278 390 432 KLO06524.1 hypothetical protein SCHPADRAFT_687509 [Schizopora paradoxa] diamond 1080 57.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Schizoporaceae Schizopora Schizopora paradoxa
32180369 32180369 PRJNA682774_P_NODE_1618_length_348_cov_0.941818_g1589_i0 PRJNA682774 1618 348 0.941818 3.27752664 Basidiomycota 5204 Fungi Fungi 138 2.6e-39   NR ORY88469.1 106004 g1589 i0 55.2 8.93103448275862 116 51 100 1 348 1 13 127 ORY88469.1 hypothetical protein BCR35DRAFT_317564 [Leucosporidium creatinivorum] diamond 3108 138 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium creatinivorum
32485175 32485175 PRJNA682774_P_NODE_5419_length_242_cov_0.923077_g5390_i0 PRJNA682774 5419 242 0.923077 2.23384634 Melampsora larici-populina 98AG31 747676 Fungi Fungi 75.9 5.55e-14   NR XP_007412505.1 747676 g5390 i0 49.3 0.880165289256198 71 35 86.8 1 223 14 121 191 XP_007412505.1 uncharacterized protein MELLADRAFT_37531, partial [Melampsora larici-populina 98AG31] diamond 213 75.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Melampsoraceae Melampsora Melampsora laricis-populina

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;