RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA682774" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA682774 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28092791 28092791 PRJNA682774_P_NODE_2965_length_270_cov_0.817259_g2936_i0 PRJNA682774 2965 270 0.817259 2.2065993 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 69.7 1.63e-11   NR MBX9879428.1 2364082 g2936 i0 68.1 0.522222222222222 47 15 52.2 0 265 125 544 590 MBX9879428.1 arginine--tRNA ligase [Candidatus Obscuribacterales bacterium] diamond 141 69.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30524438 30524438 PRJNA682774_P_NODE_153_length_1069_cov_3.080321_g130_i0 PRJNA682774 153 1069 3.080321 32.92863149 Cyanobacteria bacterium J06638_38 3023211 Bacteria Bacteria 84 1.48e-13   NR MEO1005655.1 3023211 g130 i0 29.4 0.83910196445276 299 157 71.8 13 1068 301 205 492 MEO1005655.1 ELWxxDGT repeat protein [Cyanobacteria bacterium J06638_38] diamond 897 84 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium J06638_38
31504429 31504429 PRJNA682774_P_NODE_3676_length_252_cov_0.871508_g3647_i0 PRJNA682774 3676 252 0.871508 2.19620016 Cyanobacteria bacterium P01_A01_bin.37 3023248 Bacteria Bacteria 55.5 1.36e-6   NR MEM7772814.1 3023248 g3647 i0 41.9 0.880952380952381 74 41 85.7 1 36 251 395 468 MEM7772814.1 right-handed parallel beta-helix repeat-containing protein [Cyanobacteria bacterium P01_A01_bin.37] diamond 222 55.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium P01_A01_bin.37

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;