RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA682370" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA682370 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29734372 29734372 PRJNA682370_S_NODE_3570_length_434_cov_3.526316_g2964_i0 PRJNA682370 3570 434 3.526316 15.30421144 Hydra vulgaris 6087 Cnidaria other_Eukaryota 79.7 3.35e-15   NR XP_065662037.1 6087 g2964 i0 57.4 1.44470046082949 68 26 45.6 2 429 232 95 161 XP_065662037.1 uncharacterized protein LOC136084845 [Hydra vulgaris] diamond 627 79.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
30283771 30283771 PRJNA682370_S_NODE_19592_length_163_cov_1.695312_g18980_i0 PRJNA682370 19592 163 1.695312 2.76335856 Metazoa 33208 Cnidaria other_Eukaryota 42 0.0213   NR XP_057300651.1 13093 g18980 i0 45.5 4.45398773006135 33 18 60.7 0 161 63 155 187 XP_057300651.1 zinc finger CCHC domain-containing protein 9-like [Hydractinia symbiolongicarpus] diamond 726 42 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
32485159 32485159 PRJNA682370_S_NODE_15119_length_184_cov_1.463087_g14507_i0 PRJNA682370 15119 184 1.463087 2.69208008 Paramuricea clavata 317549 Cnidaria other_Eukaryota 43.5 0.00921   NR CAB3977825.1 317549 g14507 i0 39.6 3.22826086956522 53 31 86.4 1 180 22 108 159 CAB3977825.1 TNF receptor-associated factor family DDB_G0272829-like [Paramuricea clavata] diamond 594 43.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;