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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA682370" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA682370 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9592975 9592975 PRJNA682370_S_NODE_24588_length_150_cov_1.200000_g23976_i0 PRJNA682370 24588 150 1.2 1.8 Tinamus guttatus 94827 Chordata Chordata 75.5 3.03e-14   NR XP_010212325.1 94827 g23976 i0 74 1 50 13 100 0 1 150 336 385 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 150 75.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
14693557 14693557 PRJNA682370_S_NODE_9272_length_243_cov_1.177885_g8660_i0 PRJNA682370 9272 243 1.177885 2.86226055 Tinamus guttatus 94827 Chordata Chordata 154 5.05e-42   NR XP_010212325.1 94827 g8660 i0 91.3 0.987654320987654 80 7 98.8 0 2 241 478 557 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 240 154 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
26998731 26998731 PRJNA682370_S_NODE_5382_length_342_cov_2.517915_g4770_i0 PRJNA682370 5382 342 2.517915 8.6112693 Lepidosauria 8504 Chordata Chordata 142 1.04e-40   NR XP_064417788.1 7897 g4770 i0 60.5 26.0087719298246 114 39 100 1 1 342 41 148 XP_064417788.1 ras-related protein Rap-1b isoform X3 [Latimeria chalumnae] diamond 8895 142 1 Eukaryota Opisthokonta Metazoa Chordata   Coelacanthiformes Coelacanthidae Latimeria Latimeria chalumnae
27271764 27271764 PRJNA682370_S_NODE_20283_length_161_cov_1.246032_g19671_i0 PRJNA682370 20283 161 1.246032 2.00611152 Tinamus guttatus 94827 Chordata Chordata 65.1 1.58e-10   NR XP_010212325.1 94827 g19671 i0 60.4 0.987577639751553 53 21 98.8 0 1 159 209 261 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 159 65.1 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
27303513 27303513 PRJNA682370_S_NODE_11323_length_216_cov_0.928177_g10711_i0 PRJNA682370 11323 216 0.928177 2.00486232 Charadrius vociferus 50402 Chordata Chordata 131 1.88e-33   NR XP_009883999.1 50402 g10711 i0 100 0.847222222222222 61 0 84.7 0 185 3 367 427 XP_009883999.1 PREDICTED: uncharacterized protein LOC104287046, partial [Charadrius vociferus] diamond 183 131 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Charadriidae Charadrius Charadrius vociferus
27315181 27315181 PRJNA682370_S_NODE_14563_length_188_cov_0.967320_g13951_i0 PRJNA682370 14563 188 0.96732 1.8185616 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 68.9 1.02e-11   NR XP_010212325.1 94827 g13951 i0 79.1 1.69148936170213 43 8 67 1 127 2 1 43 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 318 68.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
27555841 27555841 PRJNA682370_S_NODE_7064_length_287_cov_1.797619_g6452_i0 PRJNA682370 7064 287 1.797619 5.15916653 Tinamus guttatus 94827 Chordata Chordata 179 1.86e-51   NR XP_010212325.1 94827 g6452 i0 87.4 0.993031358885017 95 12 99.3 0 1 285 93 187 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 285 179 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
28187300 28187300 PRJNA682370_S_NODE_14986_length_185_cov_1.300000_g14374_i0 PRJNA682370 14986 185 1.3 2.405 Mobula hypostoma 723540 Chordata Chordata 48.1 3.73e-5   NR XP_062906734.1 723540 g14374 i0 50 0.843243243243243 52 24 81.1 1 150 1 4 55 XP_062906734.1 cystatin-B-like [Mobula hypostoma] diamond 156 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Myliobatiformes Myliobatidae Mobula Mobula hypostoma
28503300 28503300 PRJNA682370_S_NODE_20587_length_160_cov_1.336000_g19975_i0 PRJNA682370 20587 160 1.336 2.1376 Tinamus guttatus 94827 Chordata Chordata 63.9 4.04e-10   NR XP_010212325.1 94827 g19975 i0 67.9 0.99375 53 13 99.4 1 1 159 284 332 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 159 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
28641408 28641408 PRJNA682370_S_NODE_9967_length_232_cov_1.675127_g9355_i0 PRJNA682370 9967 232 1.675127 3.88629464 Metazoa 33208 Chordata Chordata 111 7.49e-28   NR XP_032831682.1 7757 g9355 i0 61 50.7801724137931 77 30 99.6 0 1 231 89 165 XP_032831682.1 40S ribosomal protein S3a [Petromyzon marinus] diamond 11781 112 0.991071428571429 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
30240141 30240141 PRJNA682370_S_NODE_19552_length_163_cov_2.093750_g18940_i0 PRJNA682370 19552 163 2.09375 3.4128125 Tinamus guttatus 94827 Chordata Chordata 79 2.08e-15   NR XP_010212325.1 94827 g18940 i0 76.6 0.865030674846626 47 11 86.5 0 143 3 153 199 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 141 79 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
30398574 30398574 PRJNA682370_S_NODE_23653_length_152_cov_1.162393_g23041_i0 PRJNA682370 23653 152 1.162393 1.76683736 Charadrius vociferus 50402 Chordata Chordata 69.7 3.28e-12   NR XP_009883999.1 50402 g23041 i0 82.5 0.789473684210526 40 7 78.9 0 122 3 798 837 XP_009883999.1 PREDICTED: uncharacterized protein LOC104287046, partial [Charadrius vociferus] diamond 120 69.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Charadriidae Charadrius Charadrius vociferus
30587498 30587498 PRJNA682370_S_NODE_6673_length_300_cov_1.286792_g6061_i0 PRJNA682370 6673 300 1.286792 3.860376 Erpetoichthys calabaricus 27687 Chordata Chordata 69.3 2.49e-11   NR XP_051791274.1 27687 g6061 i0 73.5 2.94 49 12 48 1 109 252 156 204 XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] diamond 882 69.7 0.994261119081779 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
31377842 31377842 PRJNA682370_S_NODE_11416_length_215_cov_1.350000_g10804_i0 PRJNA682370 11416 215 1.35 2.9025 Rana temporaria 8407 Chordata Chordata 54.3 2.02e-6   NR XP_040188010.1 8407 g10804 i0 41.5 2.73488372093023 65 34 90.7 2 206 12 181 241 XP_040188010.1 cathepsin S-like [Rana temporaria] diamond 588 54.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Rana Rana temporaria
31389522 31389522 PRJNA682370_S_NODE_14976_length_185_cov_1.333333_g14364_i0 PRJNA682370 14976 185 1.333333 2.46666605 Metazoa 33208 Chordata Chordata 109 3.15e-29   NR XP_039272528.1 7725 g14364 i0 80.3 5.93513513513513 61 12 98.9 0 185 3 17 77 XP_039272528.1 peptidyl-prolyl cis-trans isomerase FKBP1A-like [Styela clava] diamond 1098 110 0.990909090909091 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
32010387 32010387 PRJNA682370_S_NODE_19858_length_162_cov_1.976378_g19246_i0 PRJNA682370 19858 162 1.976378 3.20173236 Tinamus guttatus 94827 Chordata Chordata 55.8 3.01e-7   NR XP_010212325.1 94827 g19246 i0 64.3 0.777777777777778 42 15 77.8 0 162 37 177 218 XP_010212325.1 PREDICTED: uncharacterized protein LOC104567219, partial [Tinamus guttatus] diamond 126 55.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Tinamiformes Tinamidae Tinamus Tinamus guttatus
32390067 32390067 PRJNA682370_S_NODE_23339_length_153_cov_0.898305_g22727_i0 PRJNA682370 23339 153 0.898305 1.37440665 Charadrius vociferus 50402 Chordata Chordata 51.2 1.14e-5   NR XP_009883999.1 50402 g22727 i0 76.7 0.588235294117647 30 7 58.8 0 129 40 893 922 XP_009883999.1 PREDICTED: uncharacterized protein LOC104287046, partial [Charadrius vociferus] diamond 90 51.2 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Charadriidae Charadrius Charadrius vociferus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;