contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA682370" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14693158 | 14693158 | PRJNA682370_S_NODE_13852_length_193_cov_1.170886_g13240_i0 | PRJNA682370 | 13852 | 193 | 1.170886 | 2.25980998 | Bacillati | 1783272 | Bacteria | Bacteria | 130 | 2.52e-37 | NR | MRU65477.1 | 1280 | g13240 | i0 | 100 | 3.91709844559586 | 63 | 0 | 97.9 | 0 | 191 | 3 | 47 | 109 | MRU65477.1 chromosomal replication initiation protein DnaA [Staphylococcus aureus] | diamond | 756 | 130 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 27208347 | 27208347 | PRJNA682370_S_NODE_21802_length_156_cov_2.975207_g21190_i0 | PRJNA682370 | 21802 | 156 | 2.975207 | 4.64132292 | Streptococcus sp. | 1306 | Bacteria | Bacteria | 64.7 | 8.76e-11 | NR | MBK8157246.1 | 1306 | g21190 | i0 | 63.3 | 0.942307692307692 | 49 | 18 | 94.2 | 0 | 5 | 151 | 99 | 147 | MBK8157246.1 hypothetical protein [Streptococcus sp.] | diamond | 147 | 64.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. | ||
| 27757444 | 27757444 | PRJNA682370_S_NODE_22884_length_154_cov_0.991597_g22272_i0 | PRJNA682370 | 22884 | 154 | 0.991597 | 1.52705938 | root | 1 | Root_unresolved | Root_unresolved | 75.1 | 1.07e-15 | NR | WP_207653160.1 | 1496 | g22272 | i0 | 84.2 | 1.48051948051948 | 38 | 6 | 74 | 0 | 1 | 114 | 87 | 124 | WP_207653160.1 hypothetical protein, partial [Clostridioides difficile] | diamond | 228 | 75.5 | 0.994701986754967 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 28471829 | 28471829 | PRJNA682370_S_NODE_8446_length_258_cov_2.035874_g7834_i0 | PRJNA682370 | 8446 | 258 | 2.035874 | 5.25255492 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 100 | 2.13e-24 | NR | HAC3253152.1 | 1639 | g7834 | i0 | 63.4 | 0.953488372093023 | 82 | 30 | 95.3 | 0 | 256 | 11 | 104 | 185 | HAC3253152.1 hypothetical protein [Listeria monocytogenes] | diamond | 246 | 100 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 28945586 | 28945586 | PRJNA682370_S_NODE_8768_length_252_cov_1.760369_g8156_i0 | PRJNA682370 | 8768 | 252 | 1.760369 | 4.43612988 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 119 | 1.16e-31 | NR | HAC3253152.1 | 1639 | g8156 | i0 | 74.4 | 0.976190476190476 | 82 | 17 | 92.9 | 1 | 252 | 19 | 23 | 104 | HAC3253152.1 hypothetical protein [Listeria monocytogenes] | diamond | 246 | 119 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 29904327 | 29904327 | PRJNA682370_S_NODE_12271_length_206_cov_1.298246_g11659_i0 | PRJNA682370 | 12271 | 206 | 1.298246 | 2.67438676 | Bacillati | 1783272 | Bacteria | Bacteria | 139 | 2.24e-41 | NR | MDN8971977.1 | 1280 | g11659 | i0 | 98.5 | 1.98058252427184 | 68 | 1 | 99 | 0 | 1 | 204 | 18 | 85 | MDN8971977.1 hypothetical protein [Staphylococcus aureus] | diamond | 408 | 139 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 30694070 | 30694070 | PRJNA682370_S_NODE_20353_length_161_cov_1.087302_g19741_i0 | PRJNA682370 | 20353 | 161 | 1.087302 | 1.75055622 | root | 1 | Root_unresolved | Root_unresolved | 63.9 | 2.82e-11 | NR | WP_207653160.1 | 1496 | g19741 | i0 | 89.3 | 1.04347826086957 | 28 | 3 | 52.2 | 0 | 159 | 76 | 97 | 124 | WP_207653160.1 hypothetical protein, partial [Clostridioides difficile] | diamond | 168 | 64.3 | 0.993779160186625 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 31136111 | 31136111 | PRJNA682370_S_NODE_24475_length_150_cov_1.513043_g23863_i0 | PRJNA682370 | 24475 | 150 | 1.513043 | 2.2695645 | Bacillati | 1783272 | Bacteria | Bacteria | 95.5 | 3.81e-24 | NR | KMS09603.1 | 1280 | g23863 | i0 | 98 | 2 | 50 | 1 | 100 | 0 | 150 | 1 | 36 | 85 | KMS09603.1 hypothetical protein FE70_15090, partial [Staphylococcus aureus] | diamond | 300 | 95.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 31187651 | 31187651 | PRJNA682370_S_NODE_19295_length_164_cov_1.697674_g18683_i0 | PRJNA682370 | 19295 | 164 | 1.697674 | 2.78418536 | Streptococcus sp. | 1306 | Bacteria | Bacteria | 70.5 | 4.43e-13 | NR | MBK8156571.1 | 1306 | g18683 | i0 | 72.7 | 1.60975609756098 | 44 | 12 | 80.5 | 0 | 150 | 19 | 117 | 160 | MBK8156571.1 hypothetical protein [Streptococcus sp.] | diamond | 264 | 70.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. | ||
| 31219209 | 31219209 | PRJNA682370_S_NODE_14615_length_187_cov_1.763158_g14003_i0 | PRJNA682370 | 14615 | 187 | 1.763158 | 3.29710546 | Bacillus toyonensis | 155322 | Bacteria | Bacteria | 132 | 4.47e-38 | NR | MDF9451943.1 | 155322 | g14003 | i0 | 100 | 1.9572192513369 | 61 | 0 | 97.9 | 0 | 185 | 3 | 18 | 78 | MDF9451943.1 hypothetical protein [Bacillus toyonensis] | diamond | 366 | 132 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus toyonensis | ||
| 31440912 | 31440912 | PRJNA682370_S_NODE_17936_length_169_cov_2.895522_g17324_i0 | PRJNA682370 | 17936 | 169 | 2.895522 | 4.89343218 | Streptococcus sp. | 1306 | Bacteria | Bacteria | 67.8 | 7.48e-12 | NR | MBK8157246.1 | 1306 | g17324 | i0 | 50 | 1.13609467455621 | 64 | 24 | 99.4 | 2 | 2 | 169 | 10 | 73 | MBK8157246.1 hypothetical protein [Streptococcus sp.] | diamond | 192 | 67.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. | ||
| 32010389 | 32010389 | PRJNA682370_S_NODE_2798_length_495_cov_392.530435_g2206_i0 | PRJNA682370 | 2798 | 495 | 392.530435 | 1943.02565325 | Staphylococcus pseudintermedius | 283734 | Bacteria | Bacteria | 126 | 1.3499999999999999e-34 | NR | WP_222114562.1 | 283734 | g2206 | i0 | 100 | 1.58181818181818 | 83 | 0 | 50.3 | 0 | 287 | 39 | 1 | 83 | WP_222114562.1 hypothetical protein, partial [Staphylococcus pseudintermedius] | diamond | 783 | 126 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pseudintermedius | ||
| 32737455 | 32737455 | PRJNA682370_S_NODE_940_length_864_cov_302.525935_g566_i0 | PRJNA682370 | 940 | 864 | 302.525935 | 2613.8240784 | Staphylococcus pseudintermedius | 283734 | Bacteria | Bacteria | 115 | 1.67e-28 | NR | WP_222114562.1 | 283734 | g566 | i0 | 100 | 0.541666666666667 | 78 | 0 | 27.1 | 0 | 857 | 624 | 1 | 78 | WP_222114562.1 hypothetical protein, partial [Staphylococcus pseudintermedius] | diamond | 468 | 115 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pseudintermedius |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;