contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA682370" and tax_phylum = "Bacillariophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19791090 | 19791090 | PRJNA682370_S_NODE_11876_length_210_cov_1.388571_g11264_i0 | PRJNA682370 | 11876 | 210 | 1.388571 | 2.9159991 | Coscinodiscophyceae | 33836 | SAR_Eukaryotes | SAR_Eukaryotes | 120 | 3.0899999999999997e-32 | NR | KAL3762341.1 | 259834 | g11264 | i0 | 84.1 | 5.91428571428571 | 69 | 11 | 98.6 | 0 | 3 | 209 | 40 | 108 | KAL3762341.1 hypothetical protein ACHAWU_003846 [Discostella pseudostelligera] | diamond | 1242 | 121 | 0.991735537190083 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Discostella | Discostella pseudostelligera | ||
| 27441658 | 27441658 | PRJNA682370_S_NODE_13243_length_197_cov_1.660494_g12631_i0 | PRJNA682370 | 13243 | 197 | 1.660494 | 3.27117318 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 74.7 | 1.08e-13 | NR | CAJ1961665.1 | 2856 | g12631 | i0 | 61.5 | 4.90355329949239 | 65 | 24 | 99 | 1 | 3 | 197 | 172 | 235 | CAJ1961665.1 unnamed protein product [Cylindrotheca closterium] | diamond | 966 | 74.7 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Cylindrotheca | Cylindrotheca closterium | ||
| 31990299 | 31990299 | PRJNA682370_S_NODE_13978_length_192_cov_1.299363_g13366_i0 | PRJNA682370 | 13978 | 192 | 1.299363 | 2.49477696 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 53.9 | 9.97e-7 | NR | KAI2506646.1 | 210448 | g13366 | i0 | 47.8 | 2.171875 | 46 | 24 | 71.9 | 0 | 187 | 50 | 143 | 188 | KAI2506646.1 calcineurin-like phosphoesterase-like protein [Fragilaria crotonensis] | diamond | 417 | 54.3 | 0.992633517495396 | Eukaryota | Sar | Bacillariophyta | Fragilariophyceae | Fragilariales | Fragilariaceae | Fragilaria | Fragilaria crotonensis | ||
| 32105251 | 32105251 | PRJNA682370_S_NODE_3678_length_427_cov_2.400510_g3072_i0 | PRJNA682370 | 3678 | 427 | 2.40051 | 10.2501777 | Thalassiosira oceanica | 159749 | SAR_Eukaryotes | SAR_Eukaryotes | 132 | 1.75e-36 | NR | EJK48333.1 | 159749 | g3072 | i0 | 57.8 | 6.0983606557377 | 116 | 48 | 81.5 | 1 | 427 | 80 | 27 | 141 | EJK48333.1 hypothetical protein THAOC_32880, partial [Thalassiosira oceanica] | diamond | 2604 | 132 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira oceanica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;