RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA681861" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681861 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31262827 31262827 PRJNA681861_P_NODE_42855_length_173_cov_15.562500_g40755_i0 PRJNA681861 42855 173 15.5625 26.923125 Serinales 2916678 Fungi Fungi 45.4 0.00165   NR QWU89873.1 45357 g40755 i0 62 7.10982658959538 50 17 83.2 1 13 156 195 244 QWU89873.1 hypothetical protein CA3LBN_004221 [Candidozyma haemuli] diamond 1230 45.4 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Candidozyma Candidozyma haemuli
31357831 31357831 PRJNA681861_P_NODE_22376_length_285_cov_3.785156_g20276_i0 PRJNA681861 22376 285 3.785156 10.7876946 Ascomycota 4890 Fungi Fungi 48.1 1.19e-4   NR XP_022675093.1 1003335 g20276 i0 95.7 0.494736842105263 23 1 24.2 0 69 1 19 41 XP_022675093.1 uncharacterized protein KLMA_20782 [Kluyveromyces marxianus DMKU3-1042] diamond 141 48.1 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Kluyveromyces Kluyveromyces marxianus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;